RNA–Protein interactions for RNA: ENST00000559864.1

RNF213-209, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-209ENST00000559864 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
RNF213-209ENST00000559864 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
RNF213-209ENST00000559864 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
RNF213-209ENST00000559864 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
RNF213-209ENST00000559864 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
RNF213-209ENST00000559864 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
RNF213-209ENST00000559864 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
RNF213-209ENST00000559864 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
RNF213-209ENST00000559864 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
RNF213-209ENST00000559864 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
RNF213-209ENST00000559864 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
RNF213-209ENST00000559864 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
RNF213-209ENST00000559864 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
RNF213-209ENST00000559864 TOMM70O94826 608 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 COL4A5P29400 1685 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
RNF213-209ENST00000559864 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 HSPA6P17066 643 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 ALDH1B1P30837 517 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
RNF213-209ENST00000559864 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF213-209ENST00000559864 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
RNF213-209ENST00000559864 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
RNF213-209ENST00000559864 COL4A1P02462 1669 aa12.83□□□□□ -0.35
RNF213-209ENST00000559864 LRRC37AA6NMS7 1700 aa12.83□□□□□ -0.36
RNF213-209ENST00000559864 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
RNF213-209ENST00000559864 HYPKQ9NX55 129 aa12.83□□□□□ -0.36
RNF213-209ENST00000559864 ABCC4O15439 1325 aa12.83□□□□□ -0.36
RNF213-209ENST00000559864 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 RTKN2Q8IZC4 609 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 TSPYL6Q8N831 410 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 TRMT112Q9UI30 125 aaKnown RBP12.82□□□□□ -0.36
RNF213-209ENST00000559864 TAF1P21675 1872 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
RNF213-209ENST00000559864 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
RNF213-209ENST00000559864 GOLGA2Q08379 1002 aa12.81□□□□□ -0.36
RNF213-209ENST00000559864 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
RNF213-209ENST00000559864 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
RNF213-209ENST00000559864 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
RNF213-209ENST00000559864 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
RNF213-209ENST00000559864 POTECB2RU33 542 aa12.8□□□□□ -0.36
RNF213-209ENST00000559864 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
RNF213-209ENST00000559864 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
RNF213-209ENST00000559864 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
RNF213-209ENST00000559864 IL16Q14005 1332 aa12.8□□□□□ -0.36
RNF213-209ENST00000559864 FANCIQ9NVI1 1328 aa12.8□□□□□ -0.36
RNF213-209ENST00000559864 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
RNF213-209ENST00000559864 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
RNF213-209ENST00000559864 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
RNF213-209ENST00000559864 FAM89AQ96GI7 184 aa12.79□□□□□ -0.36
RNF213-209ENST00000559864 PSMD1Q99460 953 aa12.79□□□□□ -0.36
RNF213-209ENST00000559864 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
RNF213-209ENST00000559864 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
RNF213-209ENST00000559864 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
RNF213-209ENST00000559864 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 MYD88Q99836 296 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 SCN4AP35499 1836 aa12.78□□□□□ -0.36
RNF213-209ENST00000559864 FSTL1Q12841 308 aa12.77□□□□□ -0.37
RNF213-209ENST00000559864 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
RNF213-209ENST00000559864 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
RNF213-209ENST00000559864 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
RNF213-209ENST00000559864 APLP1P51693 650 aa12.76□□□□□ -0.37
RNF213-209ENST00000559864 GRAPQ13588 217 aa12.76□□□□□ -0.37
RNF213-209ENST00000559864 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
RNF213-209ENST00000559864 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
RNF213-209ENST00000559864 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
RNF213-209ENST00000559864 FZD9O00144 591 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
RNF213-209ENST00000559864 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
RNF213-209ENST00000559864 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 HTRA3P83110 453 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
RNF213-209ENST00000559864 G2E3Q7L622 706 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 L3MBTL3Q96JM7 780 aaPredicted RBP12.75□□□□□ -0.37
RNF213-209ENST00000559864 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
RNF213-209ENST00000559864 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
RNF213-209ENST00000559864 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
RNF213-209ENST00000559864 AOC3Q16853 763 aa12.74□□□□□ -0.37
RNF213-209ENST00000559864 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
RNF213-209ENST00000559864 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms