RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 AIMP1Q12904 312 aaKnown RBP24.9■■□□□ 1.58
KNSTRN-208ENST00000559604 PPP1R42Q7Z4L9 355 aa24.9■■□□□ 1.58
KNSTRN-208ENST00000559604 APAF1O14727 1248 aa24.89■■□□□ 1.58
KNSTRN-208ENST00000559604 C3orf67Q6ZVT6 689 aa24.89■■□□□ 1.58
KNSTRN-208ENST00000559604 RTKN2Q8IZC4 609 aa24.89■■□□□ 1.58
KNSTRN-208ENST00000559604 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
KNSTRN-208ENST00000559604 HOXB7P09629 217 aa24.88■■□□□ 1.57
KNSTRN-208ENST00000559604 RPGRQ92834 1020 aaKnown RBP24.88■■□□□ 1.57
KNSTRN-208ENST00000559604 ZNF277Q9NRM2 450 aaPredicted RBP24.88■■□□□ 1.57
KNSTRN-208ENST00000559604 CHPF2Q9P2E5 772 aa24.88■■□□□ 1.57
KNSTRN-208ENST00000559604 DDNO94850 711 aaPredicted RBP24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 ZNF853P0CG23 659 aa24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 HDGFL1Q5TGJ6 251 aa24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 DNAJC5GQ8N7S2 189 aa24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 UTP14AQ9BVJ6 771 aaKnown RBP24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 MBIPQ9NS73 344 aa24.87■■□□□ 1.57
KNSTRN-208ENST00000559604 HSP90AB3PQ58FF7 597 aa24.86■■□□□ 1.57
KNSTRN-208ENST00000559604 SLC10A5Q5PT55 438 aa24.86■■□□□ 1.57
KNSTRN-208ENST00000559604 ZEB1P37275 1124 aaPredicted RBP24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 NLRP10Q86W26 655 aa24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 SYNE4Q8N205 404 aa24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 CRAMP1Q96RY5 1269 aa24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 LAMB2P55268 1798 aa24.85■■□□□ 1.57
KNSTRN-208ENST00000559604 HTRA3P83110 453 aa24.84■■□□□ 1.57
KNSTRN-208ENST00000559604 TCIRG1Q13488 830 aa24.84■■□□□ 1.57
KNSTRN-208ENST00000559604 DUSP27Q5VZP5 1158 aa24.84■■□□□ 1.57
KNSTRN-208ENST00000559604 RBM17Q96I25 401 aaKnown RBP24.84■■□□□ 1.57
KNSTRN-208ENST00000559604 NLRP3Q96P20 1036 aa24.84■■□□□ 1.57
KNSTRN-208ENST00000559604 IARSP41252 1262 aaKnown RBP24.83■■□□□ 1.57
KNSTRN-208ENST00000559604 CC2D2BQ6DHV5 1058 aa24.83■■□□□ 1.57
KNSTRN-208ENST00000559604 SLC51AQ86UW1 340 aa24.83■■□□□ 1.57
KNSTRN-208ENST00000559604 PSMD1Q99460 953 aa24.83■■□□□ 1.57
KNSTRN-208ENST00000559604 IFT57Q9NWB7 429 aa24.83■■□□□ 1.57
KNSTRN-208ENST00000559604 RNF123Q5XPI4 1314 aa24.83■■□□□ 1.56
KNSTRN-208ENST00000559604 DBF4Q9UBU7 674 aaPredicted RBP24.82■■□□□ 1.56
KNSTRN-208ENST00000559604 ZNF541Q9H0D2 1346 aa24.82■■□□□ 1.56
KNSTRN-208ENST00000559604 GNAI1P63096 354 aa24.81■■□□□ 1.56
KNSTRN-208ENST00000559604 SCN4AP35499 1836 aa24.81■■□□□ 1.56
KNSTRN-208ENST00000559604 PPEF1O14829 653 aaPredicted RBP24.8■■□□□ 1.56
KNSTRN-208ENST00000559604 PLBD2Q8NHP8 589 aa24.8■■□□□ 1.56
KNSTRN-208ENST00000559604 L3MBTL3Q96JM7 780 aaPredicted RBP24.8■■□□□ 1.56
KNSTRN-208ENST00000559604 COL4A5P29400 1685 aa24.79■■□□□ 1.56
KNSTRN-208ENST00000559604 TCERG1O14776 1098 aaKnown RBP24.79■■□□□ 1.56
KNSTRN-208ENST00000559604 CALD1Q05682 793 aaKnown RBP24.79■■□□□ 1.56
KNSTRN-208ENST00000559604 ANKRD13DQ6ZTN6 518 aa24.79■■□□□ 1.56
KNSTRN-208ENST00000559604 TRMT112Q9UI30 125 aaKnown RBP24.79■■□□□ 1.56
KNSTRN-208ENST00000559604 FZD9O00144 591 aa24.78■■□□□ 1.56
KNSTRN-208ENST00000559604 HCLS1P14317 486 aaPredicted RBP24.78■■□□□ 1.56
KNSTRN-208ENST00000559604 HYPKQ9NX55 129 aa24.78■■□□□ 1.56
KNSTRN-208ENST00000559604 ABCC4O15439 1325 aa24.78■■□□□ 1.56
KNSTRN-208ENST00000559604 POTEIP0CG38 1075 aa24.77■■□□□ 1.56
KNSTRN-208ENST00000559604 POTEJP0CG39 1038 aa24.77■■□□□ 1.56
KNSTRN-208ENST00000559604 GRIPAP1Q4V328 841 aa24.77■■□□□ 1.56
KNSTRN-208ENST00000559604 ZNF428Q96B54 188 aa24.77■■□□□ 1.56
KNSTRN-208ENST00000559604 SH3TC1Q8TE82 1336 aa24.77■■□□□ 1.56
KNSTRN-208ENST00000559604 DDX60Q8IY21 1712 aaKnown RBP24.76■■□□□ 1.55
KNSTRN-208ENST00000559604 ELL2O00472 640 aaPredicted RBP24.76■■□□□ 1.55
KNSTRN-208ENST00000559604 ISCA1Q9BUE6 129 aa24.76■■□□□ 1.55
KNSTRN-208ENST00000559604 TAF1P21675 1872 aa24.75■■□□□ 1.55
KNSTRN-208ENST00000559604 IQCA1LA6NCM1 817 aa24.75■■□□□ 1.55
KNSTRN-208ENST00000559604 KLRG1Q96E93 195 aa24.75■■□□□ 1.55
KNSTRN-208ENST00000559604 ATP6V0A2Q9Y487 856 aa24.75■■□□□ 1.55
KNSTRN-208ENST00000559604 CHADLQ6NUI6 762 aa24.74■■□□□ 1.55
KNSTRN-208ENST00000559604 C8orf58Q8NAV2 365 aa24.74■■□□□ 1.55
KNSTRN-208ENST00000559604 JDP2Q8WYK2 163 aa24.74■■□□□ 1.55
KNSTRN-208ENST00000559604 TAF1DQ9H5J8 278 aaPredicted RBP24.74■■□□□ 1.55
KNSTRN-208ENST00000559604 ATP5J2-PTCD1G3V325 749 aa24.73■■□□□ 1.55
KNSTRN-208ENST00000559604 ZNF316A6NFI3 1004 aaPredicted RBP24.72■■□□□ 1.55
KNSTRN-208ENST00000559604 PHAXQ9H814 394 aaKnown RBP24.72■■□□□ 1.55
KNSTRN-208ENST00000559604 BBOX1O75936 387 aa24.71■■□□□ 1.55
KNSTRN-208ENST00000559604 GPC2Q8N158 579 aa24.71■■□□□ 1.55
KNSTRN-208ENST00000559604 LARGE2Q8N3Y3 721 aa24.71■■□□□ 1.55
KNSTRN-208ENST00000559604 FAM89AQ96GI7 184 aa24.71■■□□□ 1.55
KNSTRN-208ENST00000559604 TRIM28Q13263 835 aaKnown RBP24.7■■□□□ 1.54
KNSTRN-208ENST00000559604 DDX46Q7L014 1031 aaKnown RBP24.7■■□□□ 1.54
KNSTRN-208ENST00000559604 SP8Q8IXZ3 490 aa24.7■■□□□ 1.54
KNSTRN-208ENST00000559604 TMX4Q9H1E5 349 aaPredicted RBP24.7■■□□□ 1.54
KNSTRN-208ENST00000559604 HACL1Q9UJ83 578 aa24.7■■□□□ 1.54
KNSTRN-208ENST00000559604 EIF6P56537 245 aaKnown RBP24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 GRAPQ13588 217 aa24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 CCDC27Q2M243 656 aa24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 LDHDQ86WU2 507 aa24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 GRAPLQ8TC17 118 aaPredicted RBP24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 ADAMTSL1Q8N6G6 1762 aa24.69■■□□□ 1.54
KNSTRN-208ENST00000559604 GOLGA2Q08379 1002 aa24.68■■□□□ 1.54
KNSTRN-208ENST00000559604 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
KNSTRN-208ENST00000559604 TSPYL6Q8N831 410 aa24.68■■□□□ 1.54
KNSTRN-208ENST00000559604 JMYQ8N9B5 988 aa24.68■■□□□ 1.54
KNSTRN-208ENST00000559604 RTFDC1Q9BY42 306 aaPredicted RBP24.68■■□□□ 1.54
KNSTRN-208ENST00000559604 PPIP5K2O43314 1243 aa24.67■■□□□ 1.54
KNSTRN-208ENST00000559604 EPHX2P34913 555 aa24.67■■□□□ 1.54
KNSTRN-208ENST00000559604 WWC1Q8IX03 1113 aa24.67■■□□□ 1.54
KNSTRN-208ENST00000559604 TSR2Q969E8 191 aaKnown RBP24.67■■□□□ 1.54
KNSTRN-208ENST00000559604 MRS2Q9HD23 443 aa24.67■■□□□ 1.54
KNSTRN-208ENST00000559604 LRRC37AA6NMS7 1700 aa24.66■■□□□ 1.54
KNSTRN-208ENST00000559604 LTBP1Q14766 1721 aa24.66■■□□□ 1.54
KNSTRN-208ENST00000559604 PCNTO95613 3336 aa24.66■■□□□ 1.54
KNSTRN-208ENST00000559604 SF3B3Q15393 1217 aaKnown RBP24.66■■□□□ 1.54
KNSTRN-208ENST00000559604 AOC3Q16853 763 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms