RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 MCM10Q7L590 875 aa7.13□□□□□ -1.27
CDK12-204ENST00000559545 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
CDK12-204ENST00000559545 LINC00116Q8NCU8 138 aa7.13□□□□□ -1.27
CDK12-204ENST00000559545 FMNL2Q96PY5 1086 aa7.13□□□□□ -1.27
CDK12-204ENST00000559545 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
CDK12-204ENST00000559545 MAPK8IP3Q9UPT6 1336 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 SNRPA1P09661 255 aaKnown RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 MS4A1P11836 297 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 TM4SF1P30408 202 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 IL6STP40189 918 aaPredicted RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 PTGER2P43116 358 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 CALD1Q05682 793 aaKnown RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 SLC39A6Q13433 755 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 DIEXFQ68CQ4 756 aaKnown RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 COL23A1Q86Y22 540 aaPredicted RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 UBXN4Q92575 508 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 GLMNQ92990 594 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 SYTL4Q96C24 671 aaPredicted RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 MRS2Q9HD23 443 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 IFT57Q9NWB7 429 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 KIAA1522Q9P206 1035 aaPredicted RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 PPP1R1BQ9UD71 204 aaPredicted RBP7.12□□□□□ -1.27
CDK12-204ENST00000559545 USP16Q9Y5T5 823 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 C4AP0C0L4 1744 aa7.12□□□□□ -1.27
CDK12-204ENST00000559545 KCNQ3O43525 872 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 STARD3NLO95772 234 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 CRKLP46109 303 aaKnown RBP7.11□□□□□ -1.27
CDK12-204ENST00000559545 DCTN1Q14203 1278 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 PDIA6Q15084 440 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 B4GALNT3Q6L9W6 998 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 CLEC4GQ6UXB4 293 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 RASEFQ8IZ41 740 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 MTFR1LQ9H019 292 aa7.11□□□□□ -1.27
CDK12-204ENST00000559545 AFDNP55196 1824 aaKnown RBP7.11□□□□□ -1.27
CDK12-204ENST00000559545 GNPATO15228 680 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 RFX1P22670 979 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 GNAI1P63096 354 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 CNGB1Q14028 1251 aaPredicted RBP7.1□□□□□ -1.27
CDK12-204ENST00000559545 R3HDM1Q15032 1099 aaKnown RBP7.1□□□□□ -1.27
CDK12-204ENST00000559545 TRAPPC3LQ5T215 181 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 DNAJC10Q8IXB1 793 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 NLGN1Q8N2Q7 840 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 SPON1Q9HCB6 807 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 CCDC87Q9NVE4 849 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 NARFQ9UHQ1 456 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
CDK12-204ENST00000559545 RTCBQ9Y3I0 505 aaKnown RBP7.1□□□□□ -1.27
CDK12-204ENST00000559545 BRCA1P38398 1863 aaKnown RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 A0A087WZG4 1122 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 NBPF26B4DH59 902 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 ERVV-1B6SEH8 477 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 PTCD1O75127 700 aaKnown RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 GYS1P13807 737 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 KCNQ4P56696 695 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 NBPF10Q6P3W6 841 aaKnown RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 TTC5Q8N0Z6 440 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 NBPF15Q8N660 670 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 ZNF526Q8TF50 670 aaPredicted RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
CDK12-204ENST00000559545 CRISPLD2Q9H0B8 497 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 BCL2L12Q9HB09 334 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 BCORQ6W2J9 1755 aa7.09□□□□□ -1.27
CDK12-204ENST00000559545 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
CDK12-204ENST00000559545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.08□□□□□ -1.28
CDK12-204ENST00000559545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.08□□□□□ -1.28
CDK12-204ENST00000559545 CCDC146Q8IYE0 955 aa7.08□□□□□ -1.28
CDK12-204ENST00000559545 PROCA1Q8NCQ7 364 aaPredicted RBP7.08□□□□□ -1.28
CDK12-204ENST00000559545 SNRKQ9NRH2 765 aa7.08□□□□□ -1.28
CDK12-204ENST00000559545 MBIPQ9NS73 344 aa7.08□□□□□ -1.28
CDK12-204ENST00000559545 TFCP2L1Q9NZI6 479 aa7.08□□□□□ -1.28
CDK12-204ENST00000559545 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
CDK12-204ENST00000559545 KIAA1551Q9HCM1 1747 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 USP42Q9H9J4 1324 aaKnown RBP7.07□□□□□ -1.28
CDK12-204ENST00000559545 KLRG2A4D1S0 409 aaPredicted RBP7.07□□□□□ -1.28
CDK12-204ENST00000559545 VAMP4O75379 141 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
CDK12-204ENST00000559545 HIC1Q14526 733 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 TMEM259Q4ZIN3 620 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 OXER1Q8TDS5 423 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 THUMPD2Q9BTF0 503 aaKnown RBP7.07□□□□□ -1.28
CDK12-204ENST00000559545 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 DDX21Q9NR30 783 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDK12-204ENST00000559545 ZBTB1Q9Y2K1 713 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 CHD4Q14839 1912 aa7.07□□□□□ -1.28
CDK12-204ENST00000559545 ZC3H4Q9UPT8 1303 aaKnown RBP7.06□□□□□ -1.28
CDK12-204ENST00000559545 PRAMEF22A3QJZ6 481 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 PSDA5PKW4 1024 aaPredicted RBP7.06□□□□□ -1.28
CDK12-204ENST00000559545 CAMTA2O94983 1202 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 A1BGP04217 495 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 ABL2P42684 1182 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 SLFN5Q08AF3 891 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 FBXO22Q8NEZ5 403 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 SPDYE1Q8NFV5 336 aaPredicted RBP7.06□□□□□ -1.28
CDK12-204ENST00000559545 POLR3EQ9NVU0 708 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 MIS18AQ9NYP9 233 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 TSPYL4Q9UJ04 414 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 CD2APQ9Y5K6 639 aa7.06□□□□□ -1.28
CDK12-204ENST00000559545 SCN7AQ01118 1682 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms