RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.41□□□□□ -0.26
SPG11-217ENST00000559511 NOL8Q76FK4 1167 aaKnown RBP13.4□□□□□ -0.26
SPG11-217ENST00000559511 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
SPG11-217ENST00000559511 LRP6O75581 1613 aa13.4□□□□□ -0.26
SPG11-217ENST00000559511 PTMSP20962 102 aa13.4□□□□□ -0.26
SPG11-217ENST00000559511 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
SPG11-217ENST00000559511 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
SPG11-217ENST00000559511 TJP1Q07157 1748 aa13.4□□□□□ -0.26
SPG11-217ENST00000559511 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 XRCC6P12956 609 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPG11-217ENST00000559511 CUL4AQ13619 759 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
SPG11-217ENST00000559511 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 CCDC8Q9H0W5 538 aaPredicted RBP13.39□□□□□ -0.27
SPG11-217ENST00000559511 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 A1BGP04217 495 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 DIAPH3Q9NSV4 1193 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
SPG11-217ENST00000559511 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
SPG11-217ENST00000559511 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
SPG11-217ENST00000559511 PIGBQ92521 554 aa13.38□□□□□ -0.27
SPG11-217ENST00000559511 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
SPG11-217ENST00000559511 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
SPG11-217ENST00000559511 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
SPG11-217ENST00000559511 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 PTH1RQ03431 593 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
SPG11-217ENST00000559511 COL15A1P39059 1388 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 CASP7P55210 303 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
SPG11-217ENST00000559511 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 BCL9O00512 1426 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 A0A087WZG4 1122 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 EXOC5O00471 708 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 PIP4K2BP78356 416 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 PTPN12Q05209 780 aaKnown RBP13.36□□□□□ -0.27
SPG11-217ENST00000559511 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
SPG11-217ENST00000559511 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
SPG11-217ENST00000559511 KLHL40Q2TBA0 621 aa13.35□□□□□ -0.27
SPG11-217ENST00000559511 TTC14Q96N46 770 aa13.35□□□□□ -0.27
SPG11-217ENST00000559511 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
SPG11-217ENST00000559511 TOM1O60784 492 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
SPG11-217ENST00000559511 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
SPG11-217ENST00000559511 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
SPG11-217ENST00000559511 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
SPG11-217ENST00000559511 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 BRD1O95696 1058 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 CPA1P15085 419 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 MRE11P49959 708 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 TFCP2Q12800 502 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 TCHHQ07283 1943 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 ANKRD36CQ5JPF3 1778 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 AK2P54819 239 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.28
SPG11-217ENST00000559511 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 CCDC171Q6TFL3 1326 aa13.33□□□□□ -0.28
SPG11-217ENST00000559511 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 H7C1W4 665 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
SPG11-217ENST00000559511 FOXO4P98177 505 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 ADCK5Q3MIX3 580 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 RUFY3Q7L099 469 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 KCNB2Q92953 911 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
SPG11-217ENST00000559511 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
SPG11-217ENST00000559511 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
SPG11-217ENST00000559511 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 SLIT2O94813 1529 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 NUP98P52948 1817 aa13.32□□□□□ -0.28
SPG11-217ENST00000559511 HIP1O00291 1037 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 PRPF40AO75400 957 aaKnown RBP13.31□□□□□ -0.28
SPG11-217ENST00000559511 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 LMBR1LQ6UX01 489 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
SPG11-217ENST00000559511 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 CDCA7Q9BWT1 371 aaPredicted RBP13.31□□□□□ -0.28
SPG11-217ENST00000559511 SNRKQ9NRH2 765 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 THRAP3Q9Y2W1 955 aaKnown RBP13.31□□□□□ -0.28
SPG11-217ENST00000559511 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
SPG11-217ENST00000559511 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms