RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 NFKBIEO00221 500 aa21.06■□□□□ 0.96
IPO4-208ENST00000559253 ELL2O00472 640 aaPredicted RBP21.06■□□□□ 0.96
IPO4-208ENST00000559253 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
IPO4-208ENST00000559253 C21orf2O43822 256 aa21.05■□□□□ 0.96
IPO4-208ENST00000559253 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
IPO4-208ENST00000559253 ISCA1Q9BUE6 129 aa21.05■□□□□ 0.96
IPO4-208ENST00000559253 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 DDX58O95786 925 aaKnown RBP21.04■□□□□ 0.96
IPO4-208ENST00000559253 TWISTNBQ3B726 338 aaPredicted RBP21.04■□□□□ 0.96
IPO4-208ENST00000559253 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 TSPYL6Q8N831 410 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 MYH16Q9H6N6 1097 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 RNF181Q9P0P0 153 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
IPO4-208ENST00000559253 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
IPO4-208ENST00000559253 STK31Q9BXU1 1019 aa21.03■□□□□ 0.96
IPO4-208ENST00000559253 TNRC6CQ9HCJ0 1690 aaKnown RBP21.02■□□□□ 0.96
IPO4-208ENST00000559253 SLX4Q8IY92 1834 aa21.02■□□□□ 0.96
IPO4-208ENST00000559253 CCDC93Q567U6 631 aa21.02■□□□□ 0.96
IPO4-208ENST00000559253 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
IPO4-208ENST00000559253 TAOK3Q9H2K8 898 aa21.02■□□□□ 0.96
IPO4-208ENST00000559253 ZNF521Q96K83 1311 aa21.02■□□□□ 0.95
IPO4-208ENST00000559253 SBF1O95248 1867 aa21.01■□□□□ 0.95
IPO4-208ENST00000559253 RASSF7Q02833 373 aa21.01■□□□□ 0.95
IPO4-208ENST00000559253 RIC3Q7Z5B4 369 aa21.01■□□□□ 0.95
IPO4-208ENST00000559253 RBM17Q96I25 401 aaKnown RBP21.01■□□□□ 0.95
IPO4-208ENST00000559253 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
IPO4-208ENST00000559253 FER1L6Q2WGJ9 1857 aa21.01■□□□□ 0.95
IPO4-208ENST00000559253 HSP90B1P14625 803 aaKnown RBP21■□□□□ 0.95
IPO4-208ENST00000559253 PHAXQ9H814 394 aaKnown RBP21■□□□□ 0.95
IPO4-208ENST00000559253 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
IPO4-208ENST00000559253 C1QTNF8P60827 252 aa20.99■□□□□ 0.95
IPO4-208ENST00000559253 PRELPP51888 382 aa20.98■□□□□ 0.95
IPO4-208ENST00000559253 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
IPO4-208ENST00000559253 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
IPO4-208ENST00000559253 SNED1Q8TER0 1413 aa20.97■□□□□ 0.95
IPO4-208ENST00000559253 VAMP4O75379 141 aa20.97■□□□□ 0.95
IPO4-208ENST00000559253 FKBP4Q02790 459 aaKnown RBP eCLIP20.97■□□□□ 0.95
IPO4-208ENST00000559253 KSR2Q6VAB6 950 aa20.97■□□□□ 0.95
IPO4-208ENST00000559253 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
IPO4-208ENST00000559253 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
IPO4-208ENST00000559253 PSMD1Q99460 953 aa20.96■□□□□ 0.95
IPO4-208ENST00000559253 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
IPO4-208ENST00000559253 ATP5J2-PTCD1G3V325 749 aa20.95■□□□□ 0.94
IPO4-208ENST00000559253 BBOX1O75936 387 aa20.95■□□□□ 0.94
IPO4-208ENST00000559253 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
IPO4-208ENST00000559253 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
IPO4-208ENST00000559253 C3orf67Q6ZVT6 689 aa20.95■□□□□ 0.94
IPO4-208ENST00000559253 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
IPO4-208ENST00000559253 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
IPO4-208ENST00000559253 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
IPO4-208ENST00000559253 GLTPD2A6NH11 291 aa20.94■□□□□ 0.94
IPO4-208ENST00000559253 KIF3CO14782 793 aa20.94■□□□□ 0.94
IPO4-208ENST00000559253 SF3B3Q15393 1217 aaKnown RBP20.94■□□□□ 0.94
IPO4-208ENST00000559253 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
IPO4-208ENST00000559253 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
IPO4-208ENST00000559253 PPEF1O14829 653 aaPredicted RBP20.93■□□□□ 0.94
IPO4-208ENST00000559253 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
IPO4-208ENST00000559253 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
IPO4-208ENST00000559253 FAM89AQ96GI7 184 aa20.93■□□□□ 0.94
IPO4-208ENST00000559253 TMX4Q9H1E5 349 aaPredicted RBP20.93■□□□□ 0.94
IPO4-208ENST00000559253 CWC25Q9NXE8 425 aaPredicted RBP20.93■□□□□ 0.94
IPO4-208ENST00000559253 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
IPO4-208ENST00000559253 E9PSI1 815 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 PCCAP05165 728 aaPredicted RBP20.92■□□□□ 0.94
IPO4-208ENST00000559253 NEXNQ0ZGT2 675 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 FLIIQ13045 1269 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 DPY19L2Q6NUT2 758 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
IPO4-208ENST00000559253 SYNE4Q8N205 404 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 MYD88Q99836 296 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 ATP6V0A2Q9Y487 856 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 ABCC4O15439 1325 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 CACNA1SQ13698 1873 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 CACNA1FO60840 1977 aa20.92■□□□□ 0.94
IPO4-208ENST00000559253 VPS33BQ9H267 617 aa20.91■□□□□ 0.94
IPO4-208ENST00000559253 DICER1Q9UPY3 1922 aaKnown RBP20.91■□□□□ 0.94
IPO4-208ENST00000559253 TIAM2Q8IVF5 1701 aa20.9■□□□□ 0.94
IPO4-208ENST00000559253 IRS4O14654 1257 aaPredicted RBP20.9■□□□□ 0.94
IPO4-208ENST00000559253 TOMM70O94826 608 aa20.9■□□□□ 0.94
IPO4-208ENST00000559253 GRAPQ13588 217 aa20.9■□□□□ 0.94
IPO4-208ENST00000559253 GRAPLQ8TC17 118 aaPredicted RBP20.9■□□□□ 0.94
IPO4-208ENST00000559253 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
IPO4-208ENST00000559253 ZNF428Q96B54 188 aa20.89■□□□□ 0.93
IPO4-208ENST00000559253 NMRK2Q9NPI5 230 aa20.89■□□□□ 0.93
IPO4-208ENST00000559253 LAMB2P55268 1798 aa20.88■□□□□ 0.93
IPO4-208ENST00000559253 CDHR2Q9BYE9 1310 aa20.88■□□□□ 0.93
IPO4-208ENST00000559253 DDX60Q8IY21 1712 aaKnown RBP20.88■□□□□ 0.93
IPO4-208ENST00000559253 IGKV5-2P06315 115 aa20.88■□□□□ 0.93
IPO4-208ENST00000559253 IARSP41252 1262 aaKnown RBP20.88■□□□□ 0.93
IPO4-208ENST00000559253 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
IPO4-208ENST00000559253 G2E3Q7L622 706 aa20.88■□□□□ 0.93
IPO4-208ENST00000559253 RTFDC1Q9BY42 306 aaPredicted RBP20.87■□□□□ 0.93
IPO4-208ENST00000559253 ZNF277Q9NRM2 450 aaPredicted RBP20.87■□□□□ 0.93
IPO4-208ENST00000559253 CCDC88AQ3V6T2 1871 aa20.86■□□□□ 0.93
IPO4-208ENST00000559253 TCERG1O14776 1098 aaKnown RBP20.86■□□□□ 0.93
IPO4-208ENST00000559253 VEGFAP15692 232 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms