RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ADAMTS7Q9UKP4 1686 aa19.85■□□□□ 0.77
SPG11-215ENST00000559193 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
SPG11-215ENST00000559193 COL9A3Q14050 684 aaPredicted RBP19.85■□□□□ 0.77
SPG11-215ENST00000559193 MAP4K1Q92918 833 aa19.85■□□□□ 0.77
SPG11-215ENST00000559193 CCDC8Q9H0W5 538 aaPredicted RBP19.85■□□□□ 0.77
SPG11-215ENST00000559193 DDX21Q9NR30 783 aaKnown RBP eCLIP19.85■□□□□ 0.77
SPG11-215ENST00000559193 SNRKQ9NRH2 765 aa19.85■□□□□ 0.77
SPG11-215ENST00000559193 AIMP1Q12904 312 aaKnown RBP19.84■□□□□ 0.77
SPG11-215ENST00000559193 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
SPG11-215ENST00000559193 ANKLE2Q86XL3 938 aa19.84■□□□□ 0.77
SPG11-215ENST00000559193 NECAB1Q8N987 351 aa19.84■□□□□ 0.77
SPG11-215ENST00000559193 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
SPG11-215ENST00000559193 FUCA2Q9BTY2 467 aa19.84■□□□□ 0.77
SPG11-215ENST00000559193 LMTK3Q96Q04 1460 aa19.83■□□□□ 0.77
SPG11-215ENST00000559193 DDX58O95786 925 aaKnown RBP19.83■□□□□ 0.77
SPG11-215ENST00000559193 IGKV5-2P06315 115 aa19.83■□□□□ 0.77
SPG11-215ENST00000559193 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
SPG11-215ENST00000559193 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
SPG11-215ENST00000559193 A0A0D9SFI3 127 aa19.83■□□□□ 0.76
SPG11-215ENST00000559193 HIP1O00291 1037 aa19.83■□□□□ 0.76
SPG11-215ENST00000559193 SLC27A2O14975 620 aa19.83■□□□□ 0.76
SPG11-215ENST00000559193 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
SPG11-215ENST00000559193 NPHP4O75161 1426 aaPredicted RBP19.82■□□□□ 0.76
SPG11-215ENST00000559193 KCNJ4P48050 445 aa19.82■□□□□ 0.76
SPG11-215ENST00000559193 SIL1Q9H173 461 aa19.82■□□□□ 0.76
SPG11-215ENST00000559193 MRC1P22897 1456 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 GIMAP6Q6P9H5 292 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 ADCY5O95622 1261 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 BOLA2Q9H3K6 86 aa19.81■□□□□ 0.76
SPG11-215ENST00000559193 UQCRHLA0A096LP55 91 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 UQCRHP07919 91 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 MPNDQ8N594 471 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 KLHDC4Q8TBB5 520 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 FSD1Q9BTV5 496 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 C5P01031 1676 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 TAF6LQ9Y6J9 622 aa19.8■□□□□ 0.76
SPG11-215ENST00000559193 JCADQ9P266 1359 aa19.79■□□□□ 0.76
SPG11-215ENST00000559193 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
SPG11-215ENST00000559193 PSMA5P28066 241 aa19.79■□□□□ 0.76
SPG11-215ENST00000559193 RIC3Q7Z5B4 369 aa19.79■□□□□ 0.76
SPG11-215ENST00000559193 PDCL3Q9H2J4 239 aa19.79■□□□□ 0.76
SPG11-215ENST00000559193 NEURL1BA8MQ27 555 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 TRPM3Q9HCF6 1732 aaPredicted RBP19.78■□□□□ 0.76
SPG11-215ENST00000559193 SLC39A6Q13433 755 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 GLIPR1L2Q4G1C9 344 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 EPHA10Q5JZY3 1008 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 LARP1Q6PKG0 1096 aaKnown RBP19.78■□□□□ 0.76
SPG11-215ENST00000559193 CDC37L1Q7L3B6 337 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 ZNF589Q86UQ0 364 aaPredicted RBP19.78■□□□□ 0.76
SPG11-215ENST00000559193 TCEANC2Q96MN5 208 aa19.78■□□□□ 0.76
SPG11-215ENST00000559193 ZNF830Q96NB3 372 aaPredicted RBP19.78■□□□□ 0.76
SPG11-215ENST00000559193 ZNF142P52746 1687 aaPredicted RBP19.77■□□□□ 0.76
SPG11-215ENST00000559193 KDM4AO75164 1064 aa19.77■□□□□ 0.76
SPG11-215ENST00000559193 RBM10P98175 930 aaKnown RBP19.77■□□□□ 0.76
SPG11-215ENST00000559193 LARP1BQ659C4 914 aaKnown RBP19.77■□□□□ 0.76
SPG11-215ENST00000559193 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
SPG11-215ENST00000559193 SASS6Q6UVJ0 657 aa19.77■□□□□ 0.76
SPG11-215ENST00000559193 KDM6AO15550 1401 aaPredicted RBP19.77■□□□□ 0.76
SPG11-215ENST00000559193 BLOC1S2Q6QNY1 142 aa19.77■□□□□ 0.75
SPG11-215ENST00000559193 RPS6KB1P23443 525 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 GCKRQ14397 625 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 TTC6Q86TZ1 520 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 MYL6BP14649 208 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 TOB2Q14106 344 aaPredicted RBP19.76■□□□□ 0.75
SPG11-215ENST00000559193 RNF20Q5VTR2 975 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 XAGE3Q8WTP9 111 aa19.76■□□□□ 0.75
SPG11-215ENST00000559193 ERBB3P21860 1342 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 FERMT3Q86UX7 667 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 PIBF1Q8WXW3 757 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 EDC3Q96F86 508 aaKnown RBP19.75■□□□□ 0.75
SPG11-215ENST00000559193 ALDH8A1Q9H2A2 487 aaPredicted RBP19.75■□□□□ 0.75
SPG11-215ENST00000559193 TTC12Q9H892 705 aaPredicted RBP19.75■□□□□ 0.75
SPG11-215ENST00000559193 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 NEXNQ0ZGT2 675 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 MYD88Q99836 296 aa19.75■□□□□ 0.75
SPG11-215ENST00000559193 AP5Z1O43299 807 aa19.74■□□□□ 0.75
SPG11-215ENST00000559193 KRT85P78386 507 aa19.74■□□□□ 0.75
SPG11-215ENST00000559193 ANKRD1Q15327 319 aa19.74■□□□□ 0.75
SPG11-215ENST00000559193 FAM173BQ6P4H8 233 aa19.74■□□□□ 0.75
SPG11-215ENST00000559193 SLC52A2Q9HAB3 445 aa19.74■□□□□ 0.75
SPG11-215ENST00000559193 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
SPG11-215ENST00000559193 COL15A1P39059 1388 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 TAF5LO75529 589 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 COPS6Q7L5N1 327 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 ELP1O95163 1332 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 PDIA4P13667 645 aaKnown RBP19.73■□□□□ 0.75
SPG11-215ENST00000559193 PDCP20941 246 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 TSGA10IPQ3SY00 556 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 SCN11AQ9UI33 1791 aa19.73■□□□□ 0.75
SPG11-215ENST00000559193 FAM13BQ9NYF5 915 aa19.72■□□□□ 0.75
SPG11-215ENST00000559193 DBNLQ9UJU6 430 aaKnown RBP19.72■□□□□ 0.75
SPG11-215ENST00000559193 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
SPG11-215ENST00000559193 RFX5P48382 616 aaPredicted RBP19.72■□□□□ 0.75
SPG11-215ENST00000559193 LRP10Q7Z4F1 713 aa19.72■□□□□ 0.75
SPG11-215ENST00000559193 COPRSQ9NQ92 184 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms