RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 PROSER3Q2NL68 480 aa13.57□□□□□ -0.24
AP3S2-209ENST00000559162 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
AP3S2-209ENST00000559162 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
AP3S2-209ENST00000559162 ANXA1P04083 346 aa13.56□□□□□ -0.24
AP3S2-209ENST00000559162 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
AP3S2-209ENST00000559162 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
AP3S2-209ENST00000559162 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
AP3S2-209ENST00000559162 UTP14AQ9BVJ6 771 aaKnown RBP13.56□□□□□ -0.24
AP3S2-209ENST00000559162 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
AP3S2-209ENST00000559162 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
AP3S2-209ENST00000559162 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
AP3S2-209ENST00000559162 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
AP3S2-209ENST00000559162 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
AP3S2-209ENST00000559162 PSMD1Q99460 953 aa13.55□□□□□ -0.24
AP3S2-209ENST00000559162 CHPF2Q9P2E5 772 aa13.55□□□□□ -0.24
AP3S2-209ENST00000559162 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
AP3S2-209ENST00000559162 APAF1O14727 1248 aa13.54□□□□□ -0.24
AP3S2-209ENST00000559162 GNAI1P63096 354 aa13.54□□□□□ -0.24
AP3S2-209ENST00000559162 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
AP3S2-209ENST00000559162 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
AP3S2-209ENST00000559162 NLRP3Q96P20 1036 aa13.54□□□□□ -0.24
AP3S2-209ENST00000559162 MBIPQ9NS73 344 aa13.54□□□□□ -0.24
AP3S2-209ENST00000559162 SCN4AP35499 1836 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 IARSP41252 1262 aaKnown RBP13.53□□□□□ -0.24
AP3S2-209ENST00000559162 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 NLRP10Q86W26 655 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 PLBD2Q8NHP8 589 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 TMX4Q9H1E5 349 aaPredicted RBP13.53□□□□□ -0.24
AP3S2-209ENST00000559162 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
AP3S2-209ENST00000559162 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
AP3S2-209ENST00000559162 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.25
AP3S2-209ENST00000559162 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.25
AP3S2-209ENST00000559162 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
AP3S2-209ENST00000559162 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
AP3S2-209ENST00000559162 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
AP3S2-209ENST00000559162 LAMB2P55268 1798 aa13.51□□□□□ -0.25
AP3S2-209ENST00000559162 POTECB2RU33 542 aa13.51□□□□□ -0.25
AP3S2-209ENST00000559162 DDNO94850 711 aaPredicted RBP13.51□□□□□ -0.25
AP3S2-209ENST00000559162 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
AP3S2-209ENST00000559162 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
AP3S2-209ENST00000559162 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
AP3S2-209ENST00000559162 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
AP3S2-209ENST00000559162 ZNF541Q9H0D2 1346 aa13.5□□□□□ -0.25
AP3S2-209ENST00000559162 ANKRD13DQ6ZTN6 518 aa13.5□□□□□ -0.25
AP3S2-209ENST00000559162 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
AP3S2-209ENST00000559162 ABCC4O15439 1325 aa13.49□□□□□ -0.25
AP3S2-209ENST00000559162 FZD9O00144 591 aa13.49□□□□□ -0.25
AP3S2-209ENST00000559162 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
AP3S2-209ENST00000559162 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
AP3S2-209ENST00000559162 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
AP3S2-209ENST00000559162 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
AP3S2-209ENST00000559162 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
AP3S2-209ENST00000559162 BBOX1O75936 387 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
AP3S2-209ENST00000559162 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
AP3S2-209ENST00000559162 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 GPC2Q8N158 579 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
AP3S2-209ENST00000559162 ANP32CO43423 234 aa13.47□□□□□ -0.25
AP3S2-209ENST00000559162 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
AP3S2-209ENST00000559162 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
AP3S2-209ENST00000559162 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
AP3S2-209ENST00000559162 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
AP3S2-209ENST00000559162 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
AP3S2-209ENST00000559162 HACL1Q9UJ83 578 aa13.47□□□□□ -0.25
AP3S2-209ENST00000559162 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
AP3S2-209ENST00000559162 COL4A5P29400 1685 aa13.47□□□□□ -0.25
AP3S2-209ENST00000559162 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
AP3S2-209ENST00000559162 GRAPQ13588 217 aa13.46□□□□□ -0.25
AP3S2-209ENST00000559162 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
AP3S2-209ENST00000559162 RIC3Q7Z5B4 369 aa13.46□□□□□ -0.25
AP3S2-209ENST00000559162 PNMA8AQ86V59 439 aaPredicted RBP13.46□□□□□ -0.25
AP3S2-209ENST00000559162 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
AP3S2-209ENST00000559162 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
AP3S2-209ENST00000559162 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
AP3S2-209ENST00000559162 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
AP3S2-209ENST00000559162 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
AP3S2-209ENST00000559162 EPHX2P34913 555 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 HTRA3P83110 453 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
AP3S2-209ENST00000559162 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
AP3S2-209ENST00000559162 IL16Q14005 1332 aa13.44□□□□□ -0.26
AP3S2-209ENST00000559162 ATP5J2-PTCD1G3V325 749 aa13.44□□□□□ -0.26
AP3S2-209ENST00000559162 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-209ENST00000559162 LMOD1P29536 600 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-209ENST00000559162 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
AP3S2-209ENST00000559162 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-209ENST00000559162 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms