RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
CLPX-204ENST00000559152 IL25Q9H293 177 aa13.62□□□□□ -0.23
CLPX-204ENST00000559152 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
CLPX-204ENST00000559152 A1BGP04217 495 aa13.62□□□□□ -0.23
CLPX-204ENST00000559152 SNRKQ9NRH2 765 aa13.62□□□□□ -0.23
CLPX-204ENST00000559152 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
CLPX-204ENST00000559152 GOLGA6L3A6NEY3 463 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 STARD3NLO95772 234 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 ATP5JP18859 108 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 SNX14Q9Y5W7 946 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
CLPX-204ENST00000559152 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
CLPX-204ENST00000559152 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
CLPX-204ENST00000559152 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
CLPX-204ENST00000559152 FOXO4P98177 505 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
CLPX-204ENST00000559152 KLHDC4Q8TBB5 520 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 KCNB2Q92953 911 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 GPR108Q9NPR9 543 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 RFX7Q2KHR2 1363 aa13.6□□□□□ -0.23
CLPX-204ENST00000559152 TRIM28Q13263 835 aaKnown RBP13.59□□□□□ -0.23
CLPX-204ENST00000559152 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
CLPX-204ENST00000559152 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
CLPX-204ENST00000559152 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
CLPX-204ENST00000559152 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
CLPX-204ENST00000559152 TFCP2Q12800 502 aa13.59□□□□□ -0.23
CLPX-204ENST00000559152 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
CLPX-204ENST00000559152 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
CLPX-204ENST00000559152 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
CLPX-204ENST00000559152 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
CLPX-204ENST00000559152 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
CLPX-204ENST00000559152 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 KLHL40Q2TBA0 621 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 PIGBQ92521 554 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
CLPX-204ENST00000559152 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
CLPX-204ENST00000559152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
CLPX-204ENST00000559152 NUP188Q5SRE5 1749 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 EXOC5O00471 708 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 CIAO1O76071 339 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 PSMA5P28066 241 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 KCNJ4P48050 445 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
CLPX-204ENST00000559152 MAP4K1Q92918 833 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 TTC14Q96N46 770 aa13.57□□□□□ -0.24
CLPX-204ENST00000559152 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
CLPX-204ENST00000559152 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CLPX-204ENST00000559152 TOM1O60784 492 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
CLPX-204ENST00000559152 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
CLPX-204ENST00000559152 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 LRP6O75581 1613 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 COL22A1Q8NFW1 1626 aaPredicted RBP13.56□□□□□ -0.24
CLPX-204ENST00000559152 MRE11P49959 708 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 PTH1RQ03431 593 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 ZSCAN31Q96LW9 406 aaPredicted RBP13.56□□□□□ -0.24
CLPX-204ENST00000559152 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
CLPX-204ENST00000559152 BRD1O95696 1058 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
CLPX-204ENST00000559152 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
CLPX-204ENST00000559152 HAUS7Q99871 368 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
CLPX-204ENST00000559152 DDX49Q9Y6V7 483 aaKnown RBP13.55□□□□□ -0.24
CLPX-204ENST00000559152 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 EYA2O00167 538 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
CLPX-204ENST00000559152 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
CLPX-204ENST00000559152 BCL9O00512 1426 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
CLPX-204ENST00000559152 AK2P54819 239 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 PKP1Q13835 747 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
CLPX-204ENST00000559152 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
CLPX-204ENST00000559152 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms