RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
TPM1-216ENST00000558910 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
TPM1-216ENST00000558910 ZFP91Q96JP5 570 aaPredicted RBP15.67■□□□□ 0.1
TPM1-216ENST00000558910 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
TPM1-216ENST00000558910 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
TPM1-216ENST00000558910 AIMP1Q12904 312 aaKnown RBP15.66■□□□□ 0.1
TPM1-216ENST00000558910 MAMSTRQ6ZN01 415 aa15.66■□□□□ 0.1
TPM1-216ENST00000558910 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
TPM1-216ENST00000558910 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 KCNA3P22001 575 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 GPTP24298 496 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
TPM1-216ENST00000558910 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.1
TPM1-216ENST00000558910 PIM2Q9P1W9 311 aa15.65■□□□□ 0.1
TPM1-216ENST00000558910 NIP7Q9Y221 180 aaKnown RBP eCLIP15.65■□□□□ 0.1
TPM1-216ENST00000558910 DALRD3Q5D0E6 543 aaKnown RBP15.64■□□□□ 0.09
TPM1-216ENST00000558910 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
TPM1-216ENST00000558910 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
TPM1-216ENST00000558910 PDCD7Q8N8D1 485 aaKnown RBP15.64■□□□□ 0.09
TPM1-216ENST00000558910 CNBD1Q8NA66 436 aa15.64■□□□□ 0.09
TPM1-216ENST00000558910 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
TPM1-216ENST00000558910 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
TPM1-216ENST00000558910 CHL1O00533 1208 aa15.63■□□□□ 0.09
TPM1-216ENST00000558910 RGL2O15211 777 aa15.63■□□□□ 0.09
TPM1-216ENST00000558910 GTF2E1P29083 439 aaPredicted RBP15.63■□□□□ 0.09
TPM1-216ENST00000558910 MBIPQ9NS73 344 aa15.63■□□□□ 0.09
TPM1-216ENST00000558910 H0YIN7 160 aa15.62■□□□□ 0.09
TPM1-216ENST00000558910 ST5P78524 1137 aa15.62■□□□□ 0.09
TPM1-216ENST00000558910 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
TPM1-216ENST00000558910 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 DUSP27Q5VZP5 1158 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 EFCAB3Q8N7B9 438 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
TPM1-216ENST00000558910 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 MAP3K15Q6ZN16 1313 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
TPM1-216ENST00000558910 CHD4Q14839 1912 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
TPM1-216ENST00000558910 PDIA6Q15084 440 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 BABAM1Q9NWV8 329 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
TPM1-216ENST00000558910 PDE6BP35913 854 aa15.58■□□□□ 0.08
TPM1-216ENST00000558910 GNAI1P63096 354 aa15.58■□□□□ 0.08
TPM1-216ENST00000558910 RASSF7Q02833 373 aa15.58■□□□□ 0.08
TPM1-216ENST00000558910 CLEC4GQ6UXB4 293 aa15.58■□□□□ 0.08
TPM1-216ENST00000558910 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
TPM1-216ENST00000558910 TTLL6Q8N841 843 aa15.57■□□□□ 0.08
TPM1-216ENST00000558910 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
TPM1-216ENST00000558910 IFT57Q9NWB7 429 aa15.57■□□□□ 0.08
TPM1-216ENST00000558910 C21orf2O43822 256 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
TPM1-216ENST00000558910 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 C9orf131Q5VYM1 1079 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 C8orf58Q8NAV2 365 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
TPM1-216ENST00000558910 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
TPM1-216ENST00000558910 SUSD4Q5VX71 490 aa15.55■□□□□ 0.08
TPM1-216ENST00000558910 ERBB4Q15303 1308 aa15.54■□□□□ 0.08
TPM1-216ENST00000558910 UBN2Q6ZU65 1347 aa15.54■□□□□ 0.08
TPM1-216ENST00000558910 ERVV-1B6SEH8 477 aa15.54■□□□□ 0.08
TPM1-216ENST00000558910 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
TPM1-216ENST00000558910 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
TPM1-216ENST00000558910 RNF181Q9P0P0 153 aa15.54■□□□□ 0.08
TPM1-216ENST00000558910 GIGYF2Q6Y7W6 1299 aaKnown RBP15.53■□□□□ 0.08
TPM1-216ENST00000558910 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
TPM1-216ENST00000558910 TSPYL6Q8N831 410 aa15.53■□□□□ 0.08
TPM1-216ENST00000558910 GPBP1L1Q9HC44 474 aaPredicted RBP15.53■□□□□ 0.08
TPM1-216ENST00000558910 NRXN2Q9P2S2 1712 aa15.53■□□□□ 0.08
TPM1-216ENST00000558910 ABCC12Q96J65 1359 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 RTL5Q5HYW3 569 aaPredicted RBP15.52■□□□□ 0.08
TPM1-216ENST00000558910 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 OLFM4Q6UX06 510 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 MASTLQ96GX5 879 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 PHAXQ9H814 394 aaKnown RBP15.52■□□□□ 0.08
TPM1-216ENST00000558910 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
TPM1-216ENST00000558910 TAOK2Q9UL54 1235 aa15.52■□□□□ 0.08
TPM1-216ENST00000558910 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
TPM1-216ENST00000558910 SRGNP10124 158 aa15.51■□□□□ 0.07
TPM1-216ENST00000558910 PRPF40BQ6NWY9 871 aaKnown RBP15.51■□□□□ 0.07
TPM1-216ENST00000558910 ZNF34Q8IZ26 560 aa15.51■□□□□ 0.07
TPM1-216ENST00000558910 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
TPM1-216ENST00000558910 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
TPM1-216ENST00000558910 PPP1R42Q7Z4L9 355 aa15.5■□□□□ 0.07
TPM1-216ENST00000558910 CNKSR1Q969H4 720 aa15.5■□□□□ 0.07
TPM1-216ENST00000558910 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
TPM1-216ENST00000558910 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
TPM1-216ENST00000558910 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
TPM1-216ENST00000558910 NTSR2O95665 410 aa15.49■□□□□ 0.07
TPM1-216ENST00000558910 HCLS1P14317 486 aaPredicted RBP15.49■□□□□ 0.07
TPM1-216ENST00000558910 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms