RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
SMAD3-205ENST00000558428 MYD88Q99836 296 aa15.81■□□□□ 0.12
SMAD3-205ENST00000558428 ISCA1Q9BUE6 129 aa15.81■□□□□ 0.12
SMAD3-205ENST00000558428 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
SMAD3-205ENST00000558428 MAP3K2Q9Y2U5 619 aa15.81■□□□□ 0.12
SMAD3-205ENST00000558428 GRIN3BO60391 1043 aa15.8■□□□□ 0.12
SMAD3-205ENST00000558428 FKBP5Q13451 457 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-205ENST00000558428 ZNF428Q96B54 188 aa15.8■□□□□ 0.12
SMAD3-205ENST00000558428 ARFGEF1Q9Y6D6 1849 aa15.8■□□□□ 0.12
SMAD3-205ENST00000558428 ADCY9O60503 1353 aa15.79■□□□□ 0.12
SMAD3-205ENST00000558428 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
SMAD3-205ENST00000558428 ZBED9Q6R2W3 1325 aa15.79■□□□□ 0.12
SMAD3-205ENST00000558428 CHD4Q14839 1912 aa15.79■□□□□ 0.12
SMAD3-205ENST00000558428 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
SMAD3-205ENST00000558428 ZNF622Q969S3 477 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMAD3-205ENST00000558428 METTL22Q9BUU2 404 aaPredicted RBP15.79■□□□□ 0.12
SMAD3-205ENST00000558428 TRMT112Q9UI30 125 aaKnown RBP15.79■□□□□ 0.12
SMAD3-205ENST00000558428 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
SMAD3-205ENST00000558428 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
SMAD3-205ENST00000558428 SRGNP10124 158 aa15.78■□□□□ 0.12
SMAD3-205ENST00000558428 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
SMAD3-205ENST00000558428 SH3TC1Q8TE82 1336 aa15.77■□□□□ 0.12
SMAD3-205ENST00000558428 CT47B1P0C2W7 299 aaPredicted RBP15.77■□□□□ 0.12
SMAD3-205ENST00000558428 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
SMAD3-205ENST00000558428 TTLL6Q8N841 843 aa15.77■□□□□ 0.12
SMAD3-205ENST00000558428 MASTLQ96GX5 879 aa15.77■□□□□ 0.12
SMAD3-205ENST00000558428 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.11
SMAD3-205ENST00000558428 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-205ENST00000558428 STYK1Q6J9G0 422 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 SYNE4Q8N205 404 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
SMAD3-205ENST00000558428 CCDC191Q8NCU4 936 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
SMAD3-205ENST00000558428 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-205ENST00000558428 NPR1P16066 1061 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-205ENST00000558428 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 NLRP3Q96P20 1036 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 CWC25Q9NXE8 425 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-205ENST00000558428 SLX4Q8IY92 1834 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 LAMB2P55268 1798 aa15.75■□□□□ 0.11
SMAD3-205ENST00000558428 F6X3S4 739 aa15.74■□□□□ 0.11
SMAD3-205ENST00000558428 IGKV5-2P06315 115 aa15.74■□□□□ 0.11
SMAD3-205ENST00000558428 CRY2Q49AN0 593 aa15.74■□□□□ 0.11
SMAD3-205ENST00000558428 C3orf67Q6ZVT6 689 aa15.74■□□□□ 0.11
SMAD3-205ENST00000558428 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
SMAD3-205ENST00000558428 DDX60Q8IY21 1712 aaKnown RBP15.74■□□□□ 0.11
SMAD3-205ENST00000558428 NEURL1BA8MQ27 555 aa15.73■□□□□ 0.11
SMAD3-205ENST00000558428 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
SMAD3-205ENST00000558428 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
SMAD3-205ENST00000558428 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
SMAD3-205ENST00000558428 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
SMAD3-205ENST00000558428 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-205ENST00000558428 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-205ENST00000558428 PRPF40BQ6NWY9 871 aaKnown RBP15.72■□□□□ 0.11
SMAD3-205ENST00000558428 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-205ENST00000558428 PTPRCP08575 1304 aa15.71■□□□□ 0.11
SMAD3-205ENST00000558428 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
SMAD3-205ENST00000558428 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
SMAD3-205ENST00000558428 LINS1Q8NG48 757 aa15.71■□□□□ 0.11
SMAD3-205ENST00000558428 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-205ENST00000558428 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
SMAD3-205ENST00000558428 C21orf2O43822 256 aa15.7■□□□□ 0.1
SMAD3-205ENST00000558428 HSP90B1P14625 803 aaKnown RBP15.7■□□□□ 0.1
SMAD3-205ENST00000558428 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
SMAD3-205ENST00000558428 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
SMAD3-205ENST00000558428 MYH3P11055 1940 aa15.69■□□□□ 0.1
SMAD3-205ENST00000558428 YY1P25490 414 aa15.69■□□□□ 0.1
SMAD3-205ENST00000558428 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
SMAD3-205ENST00000558428 GCKRQ14397 625 aa15.69■□□□□ 0.1
SMAD3-205ENST00000558428 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
SMAD3-205ENST00000558428 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
SMAD3-205ENST00000558428 TAF1P21675 1872 aa15.68■□□□□ 0.1
SMAD3-205ENST00000558428 PDE8AO60658 829 aa15.68■□□□□ 0.1
SMAD3-205ENST00000558428 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 H7C1W4 665 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
SMAD3-205ENST00000558428 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
SMAD3-205ENST00000558428 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
SMAD3-205ENST00000558428 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
SMAD3-205ENST00000558428 SBF1O95248 1867 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 ABCC4O15439 1325 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
SMAD3-205ENST00000558428 ALDH1L1O75891 902 aa15.66■□□□□ 0.1
SMAD3-205ENST00000558428 RASSF7Q02833 373 aa15.66■□□□□ 0.1
SMAD3-205ENST00000558428 C7orf43Q8WVR3 580 aa15.66■□□□□ 0.1
SMAD3-205ENST00000558428 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-205ENST00000558428 BCAR3O75815 825 aa15.65■□□□□ 0.1
SMAD3-205ENST00000558428 GRAPQ13588 217 aa15.65■□□□□ 0.1
SMAD3-205ENST00000558428 CCDC93Q567U6 631 aa15.65■□□□□ 0.1
SMAD3-205ENST00000558428 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms