RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KLRG2A4D1S0 409 aaPredicted RBP10.91□□□□□ -0.66
TPM1-213ENST00000558400 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
TPM1-213ENST00000558400 ARHGAP27Q6ZUM4 889 aa10.91□□□□□ -0.66
TPM1-213ENST00000558400 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
TPM1-213ENST00000558400 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.661e-7■■■□□ 16.5
TPM1-213ENST00000558400 MASTLQ96GX5 879 aa10.91□□□□□ -0.66
TPM1-213ENST00000558400 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 TNRC6CQ9HCJ0 1690 aaKnown RBP10.9□□□□□ -0.66
TPM1-213ENST00000558400 SRGNP10124 158 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 GPTP24298 496 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 STYK1Q6J9G0 422 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 TSPYL6Q8N831 410 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 UTP14AQ9BVJ6 771 aaKnown RBP10.9□□□□□ -0.66
TPM1-213ENST00000558400 WWC3Q9ULE0 1092 aa10.9□□□□□ -0.66
TPM1-213ENST00000558400 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
TPM1-213ENST00000558400 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
TPM1-213ENST00000558400 NPR1P16066 1061 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 HTRA3P83110 453 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 TRIM28Q13263 835 aaKnown RBP10.89□□□□□ -0.67
TPM1-213ENST00000558400 SLC10A5Q5PT55 438 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 SOGA3Q5TF21 947 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
TPM1-213ENST00000558400 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 PCNTO95613 3336 aa10.89□□□□□ -0.67
TPM1-213ENST00000558400 IBTKQ9P2D0 1353 aaPredicted RBP10.89□□□□□ -0.67
TPM1-213ENST00000558400 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
TPM1-213ENST00000558400 E9PSI1 815 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 VAMP4O75379 141 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
TPM1-213ENST00000558400 ZNF521Q96K83 1311 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 ARFGEF1Q9Y6D6 1849 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 EXOSC9Q06265 439 aaKnown RBP10.87□□□□□ -0.67
TPM1-213ENST00000558400 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 MIER1Q8N108 512 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 ISCA1Q9BUE6 129 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
TPM1-213ENST00000558400 NMRK2Q9NPI5 230 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
TPM1-213ENST00000558400 NRXN2Q9P2S2 1712 aa10.87□□□□□ -0.67
TPM1-213ENST00000558400 UBN2Q6ZU65 1347 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 NTSR2O95665 410 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
TPM1-213ENST00000558400 FSTL1Q12841 308 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 GRIPAP1Q4V328 841 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 KSR2Q6VAB6 950 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 CCDC191Q8NCU4 936 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
TPM1-213ENST00000558400 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
TPM1-213ENST00000558400 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
TPM1-213ENST00000558400 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
TPM1-213ENST00000558400 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
TPM1-213ENST00000558400 NEXNQ0ZGT2 675 aa10.85□□□□□ -0.67
TPM1-213ENST00000558400 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
TPM1-213ENST00000558400 CRAMP1Q96RY5 1269 aa10.85□□□□□ -0.67
TPM1-213ENST00000558400 METTL22Q9BUU2 404 aaPredicted RBP10.85□□□□□ -0.67
TPM1-213ENST00000558400 TMX4Q9H1E5 349 aaPredicted RBP10.85□□□□□ -0.67
TPM1-213ENST00000558400 AFDNP55196 1824 aaKnown RBP10.84□□□□□ -0.67
TPM1-213ENST00000558400 PI4KAP2A4QPH2 592 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 C21orf2O43822 256 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 SLFN5Q08AF3 891 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 PRPF40BQ6NWY9 871 aaKnown RBP10.84□□□□□ -0.67
TPM1-213ENST00000558400 C16orf71Q8IYS4 520 aaPredicted RBP10.84□□□□□ -0.67
TPM1-213ENST00000558400 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 PI4KAP1Q8N8J0 262 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 RIC1Q4ADV7 1423 aa10.84□□□□□ -0.67
TPM1-213ENST00000558400 BCORQ6W2J9 1755 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 BBOX1O75936 387 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 LMNB1P20700 586 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 FLIIQ13045 1269 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 ZBTB38Q8NAP3 1195 aaPredicted RBP10.83□□□□□ -0.68
TPM1-213ENST00000558400 C7orf43Q8WVR3 580 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 MYD88Q99836 296 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 CWC25Q9NXE8 425 aaPredicted RBP10.83□□□□□ -0.68
TPM1-213ENST00000558400 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 SBF1O95248 1867 aa10.83□□□□□ -0.68
TPM1-213ENST00000558400 NUP98P52948 1817 aa10.82□□□□□ -0.68
TPM1-213ENST00000558400 TCERG1O14776 1098 aaKnown RBP10.82□□□□□ -0.68
TPM1-213ENST00000558400 CT47B1P0C2W7 299 aaPredicted RBP10.82□□□□□ -0.68
TPM1-213ENST00000558400 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
TPM1-213ENST00000558400 CCDC93Q567U6 631 aa10.82□□□□□ -0.68
TPM1-213ENST00000558400 DDX46Q7L014 1031 aaKnown RBP10.82□□□□□ -0.68
TPM1-213ENST00000558400 FAM89AQ96GI7 184 aa10.82□□□□□ -0.68
TPM1-213ENST00000558400 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
TPM1-213ENST00000558400 ZC3H4Q9UPT8 1303 aaKnown RBP10.82□□□□□ -0.68
TPM1-213ENST00000558400 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
TPM1-213ENST00000558400 PCCAP05165 728 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms