RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 MYD88Q99836 296 aa15.35■□□□□ 0.05
CDK12-203ENST00000558240 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
CDK12-203ENST00000558240 H0YIN7 160 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 KCNA3P22001 575 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
CDK12-203ENST00000558240 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 ERFEQ4G0M1 354 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
CDK12-203ENST00000558240 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
CDK12-203ENST00000558240 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
CDK12-203ENST00000558240 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
CDK12-203ENST00000558240 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.04
CDK12-203ENST00000558240 COL11A2P13942 1736 aaPredicted RBP15.32■□□□□ 0.04
CDK12-203ENST00000558240 CHRNA5P30532 468 aa15.32■□□□□ 0.04
CDK12-203ENST00000558240 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
CDK12-203ENST00000558240 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
CDK12-203ENST00000558240 CWC25Q9NXE8 425 aaPredicted RBP15.32■□□□□ 0.04
CDK12-203ENST00000558240 PIM2Q9P1W9 311 aa15.32■□□□□ 0.04
CDK12-203ENST00000558240 PTPRCP08575 1304 aa15.32■□□□□ 0.04
CDK12-203ENST00000558240 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
CDK12-203ENST00000558240 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 SRGNP10124 158 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 GPR162Q16538 588 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
CDK12-203ENST00000558240 LAMB2P55268 1798 aa15.31■□□□□ 0.04
CDK12-203ENST00000558240 NEURL1BA8MQ27 555 aa15.3■□□□□ 0.04
CDK12-203ENST00000558240 CACNA1SQ13698 1873 aa15.3■□□□□ 0.04
CDK12-203ENST00000558240 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
CDK12-203ENST00000558240 LINS1Q8NG48 757 aa15.3■□□□□ 0.04
CDK12-203ENST00000558240 MASTLQ96GX5 879 aa15.3■□□□□ 0.04
CDK12-203ENST00000558240 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
CDK12-203ENST00000558240 TNRC6CQ9HCJ0 1690 aaKnown RBP15.3■□□□□ 0.04
CDK12-203ENST00000558240 MYH3P11055 1940 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 CHD4Q14839 1912 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 F6X3S4 739 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 PCCAP05165 728 aaPredicted RBP15.29■□□□□ 0.04
CDK12-203ENST00000558240 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
CDK12-203ENST00000558240 NPR1P16066 1061 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
CDK12-203ENST00000558240 STYK1Q6J9G0 422 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
CDK12-203ENST00000558240 YBX3P16989 372 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDK12-203ENST00000558240 CWF19L2Q2TBE0 894 aaKnown RBP15.28■□□□□ 0.04
CDK12-203ENST00000558240 BEND3Q5T5X7 828 aa15.28■□□□□ 0.04
CDK12-203ENST00000558240 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
CDK12-203ENST00000558240 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
CDK12-203ENST00000558240 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDK12-203ENST00000558240 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
CDK12-203ENST00000558240 SLX4Q8IY92 1834 aa15.27■□□□□ 0.04
CDK12-203ENST00000558240 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
CDK12-203ENST00000558240 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.04
CDK12-203ENST00000558240 GCKRQ14397 625 aa15.27■□□□□ 0.04
CDK12-203ENST00000558240 ARHGAP45Q92619 1136 aa15.27■□□□□ 0.04
CDK12-203ENST00000558240 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
CDK12-203ENST00000558240 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 H7C1W4 665 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 ALDH1B1P30837 517 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
CDK12-203ENST00000558240 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
CDK12-203ENST00000558240 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
CDK12-203ENST00000558240 BCAR3O75815 825 aa15.25■□□□□ 0.03
CDK12-203ENST00000558240 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
CDK12-203ENST00000558240 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
CDK12-203ENST00000558240 RPGRQ92834 1020 aaKnown RBP15.25■□□□□ 0.03
CDK12-203ENST00000558240 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
CDK12-203ENST00000558240 API5Q9BZZ5 524 aaKnown RBP15.25■□□□□ 0.03
CDK12-203ENST00000558240 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
CDK12-203ENST00000558240 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
CDK12-203ENST00000558240 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
CDK12-203ENST00000558240 CRAMP1Q96RY5 1269 aa15.24■□□□□ 0.03
CDK12-203ENST00000558240 TAF1P21675 1872 aa15.24■□□□□ 0.03
CDK12-203ENST00000558240 PDE8AO60658 829 aa15.23■□□□□ 0.03
CDK12-203ENST00000558240 CASP7P55210 303 aa15.23■□□□□ 0.03
CDK12-203ENST00000558240 PRPF40BQ6NWY9 871 aaKnown RBP15.23■□□□□ 0.03
CDK12-203ENST00000558240 JARID2Q92833 1246 aaPredicted RBP15.23■□□□□ 0.03
CDK12-203ENST00000558240 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
CDK12-203ENST00000558240 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
CDK12-203ENST00000558240 SBF1O95248 1867 aa15.22■□□□□ 0.03
CDK12-203ENST00000558240 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
CDK12-203ENST00000558240 CCDC88AQ3V6T2 1871 aa15.22■□□□□ 0.03
CDK12-203ENST00000558240 GRM8O00222 908 aa15.21■□□□□ 0.03
CDK12-203ENST00000558240 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
CDK12-203ENST00000558240 SOGA3Q5TF21 947 aa15.21■□□□□ 0.03
CDK12-203ENST00000558240 ATF7IPQ6VMQ6 1270 aa15.21■□□□□ 0.03
CDK12-203ENST00000558240 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
CDK12-203ENST00000558240 C7orf43Q8WVR3 580 aa15.21■□□□□ 0.03
CDK12-203ENST00000558240 C9orf78Q9NZ63 289 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms