RNA–Protein interactions for RNA: ENST00000557589.1

TIMELESS-205, Transcript of timeless circadian regulator, humanhuman

TSL 2

Gene TIMELESS, Length 2,784 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-205ENST00000557589 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 CDK11BP21127 795 aaKnown RBP12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 PSMA5P28066 241 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 TSGA10IPQ3SY00 556 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
TIMELESS-205ENST00000557589 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 TMEM63CQ9P1W3 806 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 NOL7Q9UMY1 257 aaKnown RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 ZBTB22O15209 634 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 TPM2P07951 284 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 NEXNQ0ZGT2 675 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 KCNQ3O43525 872 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 NECTIN1Q15223 517 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 KRT28Q7Z3Y7 464 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 SMAP1Q8IYB5 467 aaPredicted RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
TIMELESS-205ENST00000557589 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 CPDO75976 1380 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 MSNP26038 577 aaKnown RBP12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 AK2P54819 239 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 UBE2HP62256 183 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 PDIA6Q15084 440 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
TIMELESS-205ENST00000557589 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 STX6O43752 255 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 PDCP20941 246 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 IL25Q9H293 177 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
TIMELESS-205ENST00000557589 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 KRT32Q14532 448 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 GLI3P10071 1580 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 F13A1P00488 732 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 PDRG1Q9NUG6 133 aa12.1□□□□□ -0.47
TIMELESS-205ENST00000557589 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 OFD1O75665 1012 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 PHKG2P15735 406 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 ATF3P18847 181 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 AACSQ86V21 672 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 RASEFQ8IZ41 740 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 ELP1O95163 1332 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
TIMELESS-205ENST00000557589 SYCE3A1L190 88 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 SASH1O94885 1247 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 SYT1P21579 422 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 GCKRQ14397 625 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 ARID3AQ99856 593 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 ATP5JP18859 108 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 ZKSCAN5Q9Y2L8 839 aa12.08□□□□□ -0.48
TIMELESS-205ENST00000557589 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
TIMELESS-205ENST00000557589 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
TIMELESS-205ENST00000557589 GPR108Q9NPR9 543 aa12.07□□□□□ -0.48
TIMELESS-205ENST00000557589 NUP188Q5SRE5 1749 aa12.07□□□□□ -0.48
TIMELESS-205ENST00000557589 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms