RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 NUDT7P0C024 238 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 FER1L6Q2WGJ9 1857 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 WDR33Q9C0J8 1336 aaKnown RBP9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 FLT4P35916 1363 aa9.5□□□□□ -0.89
SPTLC2-206ENST00000557566 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 HSP90AB2PQ58FF8 381 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 ZSWIM6Q9HCJ5 1215 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 SRP68Q9UHB9 627 aaKnown RBP9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 KIF24Q5T7B8 1368 aa9.49□□□□□ -0.89
SPTLC2-206ENST00000557566 NRXN2Q9P2S2 1712 aa9.48□□□□□ -0.89
SPTLC2-206ENST00000557566 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
SPTLC2-206ENST00000557566 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
SPTLC2-206ENST00000557566 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
SPTLC2-206ENST00000557566 PHKG2P15735 406 aa9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 TM4SF1P30408 202 aa9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 MCOLN1Q9GZU1 580 aa9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 ABT1Q9ULW3 272 aaKnown RBP9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 NCAPD2Q15021 1401 aa9.47□□□□□ -0.89
SPTLC2-206ENST00000557566 CASP8AP2Q9UKL3 1982 aa9.46□□□□□ -0.89
SPTLC2-206ENST00000557566 ADAMTS7Q9UKP4 1686 aa9.46□□□□□ -0.89
SPTLC2-206ENST00000557566 H0YIN7 160 aa9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 ZPR1O75312 459 aa9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 CRKLP46109 303 aaKnown RBP9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 C2CD5Q86YS7 1000 aa9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.9
SPTLC2-206ENST00000557566 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 EVI5O60447 810 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 ECE1P42892 770 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 EAPPQ56P03 285 aaPredicted RBP9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 TAOK3Q9H2K8 898 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 LTBP3Q9NS15 1303 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
SPTLC2-206ENST00000557566 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
SPTLC2-206ENST00000557566 USPL1Q5W0Q7 1092 aa9.44□□□□□ -0.9
SPTLC2-206ENST00000557566 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
SPTLC2-206ENST00000557566 TJP1Q07157 1748 aa9.44□□□□□ -0.9
SPTLC2-206ENST00000557566 LTBP1Q14766 1721 aa9.44□□□□□ -0.9
SPTLC2-206ENST00000557566 CACNA1SQ13698 1873 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 CA12O43570 354 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 C21orf2O43822 256 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 DGKZQ13574 1117 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 NFIXQ14938 502 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 CAPNS2Q96L46 248 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 GPR101Q96P66 508 aaPredicted RBP9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
SPTLC2-206ENST00000557566 TRPM7Q96QT4 1865 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 FYB1O15117 783 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 SERPINB2P05120 415 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 HSP90AB1P08238 724 aaKnown RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 GRM1Q13255 1194 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 ZNF622Q969S3 477 aaKnown RBP eCLIP9.42□□□□□ -0.91e-12■■■■□ 22.6
SPTLC2-206ENST00000557566 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 ANKRD31Q8N7Z5 1873 aa9.42□□□□□ -0.9
SPTLC2-206ENST00000557566 CARMIL3Q8ND23 1372 aa9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 EPHX2P34913 555 aa9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 CABP4P57796 275 aa9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 CARD11Q9BXL7 1154 aa9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 DDX21Q9NR30 783 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
SPTLC2-206ENST00000557566 PDE6BP35913 854 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 MAP2K2P36507 400 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 CYP4F22Q6NT55 531 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
SPTLC2-206ENST00000557566 SLX4Q8IY92 1834 aa9.4□□□□□ -0.91
SPTLC2-206ENST00000557566 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 SOX10P56693 466 aa9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 DDX12PQ92771 950 aa9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 EYA1Q99502 592 aa9.39□□□□□ -0.91
SPTLC2-206ENST00000557566 COL15A1P39059 1388 aa9.38□□□□□ -0.91
SPTLC2-206ENST00000557566 CLSPNQ9HAW4 1339 aa9.38□□□□□ -0.91
SPTLC2-206ENST00000557566 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
SPTLC2-206ENST00000557566 ANKRD13DQ6ZTN6 518 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms