RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-215	ENST00000557517	RRAGC	Q9HB90	399 aa		13.88	□□□□□ -0.19
PSMC6-215	ENST00000557517	MYL6B	P14649	208 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	NPR1	P16066	1061 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	RASSF7	Q02833	373 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	NEUROD2	Q15784	382 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	ZNF34	Q8IZ26	560 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	PHF12	Q96QT6	1004 aa		13.87	□□□□□ -0.19
PSMC6-215	ENST00000557517	GLTPD2	A6NH11	291 aa		13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	HSPA1A	P0DMV8	641 aa	Known RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	HSPA1B	P0DMV9	641 aa	Known RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	ZEB1	P37275	1124 aa	Predicted RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	MNX1	P50219	401 aa	Predicted RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	PRPF40B	Q6NWY9	871 aa	Known RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	LTBP3	Q9NS15	1303 aa		13.86	□□□□□ -0.19
PSMC6-215	ENST00000557517	VIRMA	Q69YN4	1812 aa	Known RBP	13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	EIF2S2	P20042	333 aa	Known RBP	13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	CRY2	Q49AN0	593 aa		13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	SOGA3	Q5TF21	947 aa		13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	KIF6	Q6ZMV9	814 aa		13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	NYX	Q9GZU5	481 aa		13.85	□□□□□ -0.19
PSMC6-215	ENST00000557517	DLEC1	Q9Y238	1755 aa		13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	GTF2E1	P29083	439 aa	Predicted RBP	13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	ALDH1B1	P30837	517 aa		13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	SUSD4	Q5VX71	490 aa		13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	CFAP44	Q96MT7	982 aa		13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	ZBTB3	Q9H5J0	574 aa		13.84	□□□□□ -0.19
PSMC6-215	ENST00000557517	SCN7A	Q01118	1682 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	FAM177B	A6PVY3	158 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	ZNF853	P0CG23	659 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	HOXA10	P31260	410 aa	Predicted RBP	13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	PROSER3	Q2NL68	480 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	TAOK3	Q9H2K8	898 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	TIAM2	Q8IVF5	1701 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	UBN2	Q6ZU65	1347 aa		13.83	□□□□□ -0.2
PSMC6-215	ENST00000557517	CCDC88A	Q3V6T2	1871 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	APAF1	O14727	1248 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	HOXB7	P09629	217 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	VEGFA	P15692	232 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	KRT24	Q2M2I5	525 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	ERFE	Q4G0M1	354 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	SLC10A5	Q5PT55	438 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	DPY19L2	Q6NUT2	758 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	COPS6	Q7L5N1	327 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	NUTM1	Q86Y26	1132 aa		13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	AFDN	P55196	1824 aa	Known RBP	13.82	□□□□□ -0.2
PSMC6-215	ENST00000557517	POTEC	B2RU33	542 aa		13.81	□□□□□ -0.2
PSMC6-215	ENST00000557517	GPT	P24298	496 aa		13.81	□□□□□ -0.2
PSMC6-215	ENST00000557517	PARP10	Q53GL7	1025 aa		13.81	□□□□□ -0.2
PSMC6-215	ENST00000557517	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMC6-215	ENST00000557517	NTSR2	O95665	410 aa		13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	ANXA1	P04083	346 aa		13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	CCDC93	Q567U6	631 aa		13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	PPP1R42	Q7Z4L9	355 aa		13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	RTKN2	Q8IZC4	609 aa		13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	LAS1L	Q9Y4W2	734 aa	Known RBP	13.8	□□□□□ -0.2
PSMC6-215	ENST00000557517	TCIRG1	Q13488	830 aa		13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	CC2D2B	Q6DHV5	1058 aa		13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	XAGE3	Q8WTP9	111 aa		13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	CRAMP1	Q96RY5	1269 aa		13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	MBIP	Q9NS73	344 aa		13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	DBF4	Q9UBU7	674 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMC6-215	ENST00000557517	KDM3B	Q7LBC6	1761 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	DICER1	Q9UPY3	1922 aa	Known RBP	13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	CALD1	Q05682	793 aa	Known RBP	13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	CCDC184	Q52MB2	194 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	HSP90AB3P	Q58FF7	597 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	DUSP27	Q5VZP5	1158 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	NECTIN2	Q92692	538 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	UTP14A	Q9BVJ6	771 aa	Known RBP	13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	IFT57	Q9NWB7	429 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	ABCC12	Q96J65	1359 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	RIC1	Q4ADV7	1423 aa		13.78	□□□□□ -0.2
PSMC6-215	ENST00000557517	AIMP1	Q12904	312 aa	Known RBP	13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	GRIPAP1	Q4V328	841 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	HDGFL1	Q5TGJ6	251 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	RNF123	Q5XPI4	1314 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	OLFM4	Q6UX06	510 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	ANKRD13D	Q6ZTN6	518 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	NLRP10	Q86W26	655 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	NLRP3	Q96P20	1036 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	CHPF2	Q9P2E5	772 aa		13.77	□□□□□ -0.21
PSMC6-215	ENST00000557517	ANKRD31	Q8N7Z5	1873 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	BCOR	Q6W2J9	1755 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	GNAI1	P63096	354 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	C3orf67	Q6ZVT6	689 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	PLBD2	Q8NHP8	589 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	RPGR	Q92834	1020 aa	Known RBP	13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	PSMD1	Q99460	953 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	HYPK	Q9NX55	129 aa		13.76	□□□□□ -0.21
PSMC6-215	ENST00000557517	DLG5	Q8TDM6	1919 aa		13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	DDN	O94850	711 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	SLC34A2	O95436	690 aa		13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	TRIM28	Q13263	835 aa	Known RBP	13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	CCDC27	Q2M243	656 aa		13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	SYNE4	Q8N205	404 aa		13.75	□□□□□ -0.21
PSMC6-215	ENST00000557517	RBM17	Q96I25	401 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms