RNA–Protein interactions for RNA: ENST00000557434.5

LGMN-216, Transcript of legumain, humanhuman

TSL 5 BASIC

Gene LGMN, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-216ENST00000557434 HSP90AB3PQ58FF7 597 aa21.77■■□□□ 1.08
LGMN-216ENST00000557434 UBE3BQ7Z3V4 1068 aa21.77■■□□□ 1.08
LGMN-216ENST00000557434 ANKRD44Q8N8A2 993 aa21.77■■□□□ 1.08
LGMN-216ENST00000557434 COL24A1Q17RW2 1714 aa21.77■■□□□ 1.08
LGMN-216ENST00000557434 ADRA2BP18089 450 aa21.76■■□□□ 1.07
LGMN-216ENST00000557434 BAG6P46379 1132 aa21.76■■□□□ 1.07
LGMN-216ENST00000557434 HDAC1Q13547 482 aaPredicted RBP21.76■■□□□ 1.07
LGMN-216ENST00000557434 EPHA10Q5JZY3 1008 aa21.76■■□□□ 1.07
LGMN-216ENST00000557434 CLEC4GQ6UXB4 293 aa21.76■■□□□ 1.07
LGMN-216ENST00000557434 SYNE4Q8N205 404 aa21.76■■□□□ 1.07
LGMN-216ENST00000557434 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
LGMN-216ENST00000557434 RGL2O15211 777 aa21.75■■□□□ 1.07
LGMN-216ENST00000557434 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
LGMN-216ENST00000557434 TBC1D9BQ66K14 1250 aa21.75■■□□□ 1.07
LGMN-216ENST00000557434 SF3B2Q13435 895 aaKnown RBP21.74■■□□□ 1.07
LGMN-216ENST00000557434 RFC4P35249 363 aa21.74■■□□□ 1.07
LGMN-216ENST00000557434 QSER1Q2KHR3 1735 aa21.74■■□□□ 1.07
LGMN-216ENST00000557434 SUSD4Q5VX71 490 aa21.74■■□□□ 1.07
LGMN-216ENST00000557434 BICC1Q9H694 974 aaKnown RBP21.74■■□□□ 1.07
LGMN-216ENST00000557434 ZPR1O75312 459 aa21.73■■□□□ 1.07
LGMN-216ENST00000557434 RPAP2Q8IXW5 612 aaPredicted RBP21.73■■□□□ 1.07
LGMN-216ENST00000557434 FAM89AQ96GI7 184 aa21.73■■□□□ 1.07
LGMN-216ENST00000557434 TFCP2L1Q9NZI6 479 aa21.73■■□□□ 1.07
LGMN-216ENST00000557434 NIP7Q9Y221 180 aaKnown RBP eCLIP21.73■■□□□ 1.07
LGMN-216ENST00000557434 PNPLA7Q6ZV29 1317 aa21.72■■□□□ 1.07
LGMN-216ENST00000557434 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
LGMN-216ENST00000557434 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
LGMN-216ENST00000557434 ZNF652Q9Y2D9 606 aa21.72■■□□□ 1.07
LGMN-216ENST00000557434 DDX60Q8IY21 1712 aaKnown RBP21.72■■□□□ 1.07
LGMN-216ENST00000557434 PCCAP05165 728 aaPredicted RBP21.71■■□□□ 1.07
LGMN-216ENST00000557434 GYS1P13807 737 aa21.71■■□□□ 1.07
LGMN-216ENST00000557434 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
LGMN-216ENST00000557434 ZBTB38Q8NAP3 1195 aaPredicted RBP21.71■■□□□ 1.07
LGMN-216ENST00000557434 NTSR2O95665 410 aa21.71■■□□□ 1.07
LGMN-216ENST00000557434 FOXO4P98177 505 aa21.71■■□□□ 1.07
LGMN-216ENST00000557434 MTX1Q13505 466 aa21.71■■□□□ 1.07
LGMN-216ENST00000557434 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
LGMN-216ENST00000557434 UPF1Q92900 1129 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■■□□□ 13.3
LGMN-216ENST00000557434 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
LGMN-216ENST00000557434 HMGB2P26583 209 aaKnown RBP21.7■■□□□ 1.06
LGMN-216ENST00000557434 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
LGMN-216ENST00000557434 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
LGMN-216ENST00000557434 MYH3P11055 1940 aa21.7■■□□□ 1.06
LGMN-216ENST00000557434 CASZ1Q86V15 1759 aa21.7■■□□□ 1.06
LGMN-216ENST00000557434 POLA2Q14181 598 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 RABL6Q3YEC7 729 aaPredicted RBP21.69■■□□□ 1.06
LGMN-216ENST00000557434 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 SKAP1Q86WV1 359 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 LAMB2P55268 1798 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 SSH3Q8TE77 659 aa21.69■■□□□ 1.06
LGMN-216ENST00000557434 FAM177BA6PVY3 158 aa21.68■■□□□ 1.06
LGMN-216ENST00000557434 TRMT112Q9UI30 125 aaKnown RBP21.68■■□□□ 1.06
LGMN-216ENST00000557434 CDHR2Q9BYE9 1310 aa21.68■■□□□ 1.06
LGMN-216ENST00000557434 NFIXQ14938 502 aa21.67■■□□□ 1.06
LGMN-216ENST00000557434 PLA2G12BQ9BX93 195 aa21.66■■□□□ 1.06
LGMN-216ENST00000557434 SRGAP3O43295 1099 aa21.66■■□□□ 1.06
LGMN-216ENST00000557434 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
LGMN-216ENST00000557434 NUTM1Q86Y26 1132 aa21.66■■□□□ 1.06
LGMN-216ENST00000557434 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
LGMN-216ENST00000557434 DCTPP1Q9H773 170 aa21.66■■□□□ 1.06
LGMN-216ENST00000557434 PDGFDQ9GZP0 370 aaPredicted RBP21.65■■□□□ 1.06
LGMN-216ENST00000557434 IRS4O14654 1257 aaPredicted RBP21.64■■□□□ 1.06
LGMN-216ENST00000557434 TM4SF1P30408 202 aa21.64■■□□□ 1.06
LGMN-216ENST00000557434 SH3TC1Q8TE82 1336 aa21.64■■□□□ 1.06
LGMN-216ENST00000557434 RFX5P48382 616 aaPredicted RBP21.64■■□□□ 1.05
LGMN-216ENST00000557434 LMBR1LQ6UX01 489 aa21.64■■□□□ 1.05
LGMN-216ENST00000557434 SETDB2Q96T68 719 aa21.64■■□□□ 1.05
LGMN-216ENST00000557434 STK32BQ9NY57 414 aa21.64■■□□□ 1.05
LGMN-216ENST00000557434 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.05
LGMN-216ENST00000557434 ABCC12Q96J65 1359 aa21.63■■□□□ 1.05
LGMN-216ENST00000557434 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
LGMN-216ENST00000557434 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
LGMN-216ENST00000557434 DDR1Q08345 913 aa21.62■■□□□ 1.05
LGMN-216ENST00000557434 ERFEQ4G0M1 354 aa21.62■■□□□ 1.05
LGMN-216ENST00000557434 HMMRO75330 724 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 CSF1RP07333 972 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 CARMIL3Q8ND23 1372 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 KLHDC4Q8TBB5 520 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 TNRC6CQ9HCJ0 1690 aaKnown RBP21.61■■□□□ 1.05
LGMN-216ENST00000557434 PA2G4Q9UQ80 394 aaKnown RBP21.61■■□□□ 1.05
LGMN-216ENST00000557434 PDZRN3Q9UPQ7 1066 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 EXOC6BQ9Y2D4 811 aa21.61■■□□□ 1.05
LGMN-216ENST00000557434 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
LGMN-216ENST00000557434 COL4A1P02462 1669 aa21.6■■□□□ 1.05
LGMN-216ENST00000557434 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
LGMN-216ENST00000557434 TTLL11Q8NHH1 800 aa21.6■■□□□ 1.05
LGMN-216ENST00000557434 GCC1Q96CN9 775 aa21.6■■□□□ 1.05
LGMN-216ENST00000557434 MSH5O43196 834 aa21.59■■□□□ 1.05
LGMN-216ENST00000557434 PDE8AO60658 829 aa21.59■■□□□ 1.05
LGMN-216ENST00000557434 CTSWP56202 376 aa21.59■■□□□ 1.05
LGMN-216ENST00000557434 CCDC24Q8N4L8 307 aa21.59■■□□□ 1.05
LGMN-216ENST00000557434 POLRMTO00411 1230 aaKnown RBP21.59■■□□□ 1.05
LGMN-216ENST00000557434 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
LGMN-216ENST00000557434 FAM161AQ3B820 660 aa21.59■■□□□ 1.05
LGMN-216ENST00000557434 NBPF5PQ86XG9 351 aaPredicted RBP21.59■■□□□ 1.05
LGMN-216ENST00000557434 CCDC85AQ96PX6 553 aaPredicted RBP21.59■■□□□ 1.05
LGMN-216ENST00000557434 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
LGMN-216ENST00000557434 NUCB1Q02818 461 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms