RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 TNS2Q63HR2 1409 aa10.81□□□□□ -0.68
PPP4R3A-212ENST00000557382 CHRDL2Q6WN34 429 aa10.8□□□□□ -0.68
PPP4R3A-212ENST00000557382 PA2G4Q9UQ80 394 aaKnown RBP10.8□□□□□ -0.68
PPP4R3A-212ENST00000557382 H7C1W4 665 aa10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 BRD1O95696 1058 aa10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 RFX5P48382 616 aaPredicted RBP10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 CASP7P55210 303 aa10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 ZGPATQ8N5A5 531 aaKnown RBP10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 EAF2Q96CJ1 260 aaPredicted RBP10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 TTC14Q96N46 770 aa10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 TEX13AQ9BXU3 409 aaPredicted RBP10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 SNX14Q9Y5W7 946 aa10.79□□□□□ -0.68
PPP4R3A-212ENST00000557382 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 ATP5JP18859 108 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 CWC27Q6UX04 472 aaKnown RBP10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 ZSCAN31Q96LW9 406 aaPredicted RBP10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 IL25Q9H293 177 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 GPR108Q9NPR9 543 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 ATG3Q9NT62 314 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 ZDHHC9Q9Y397 364 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 TJP1Q07157 1748 aa10.78□□□□□ -0.68
PPP4R3A-212ENST00000557382 A0A087WZG4 1122 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 PTPN12Q05209 780 aaKnown RBP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 EPHA10Q5JZY3 1008 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 GZF1Q9H116 711 aaPredicted RBP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 LMBRD1Q9NUN5 540 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 DDX49Q9Y6V7 483 aaKnown RBP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 COL14A1Q05707 1796 aaKnown RBP10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 SPEF2Q9C093 1822 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 JCADQ9P266 1359 aa10.77□□□□□ -0.69
PPP4R3A-212ENST00000557382 LRP6O75581 1613 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 ZKSCAN1P17029 563 aaPredicted RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 PSMA5P28066 241 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 ZNF445P59923 1031 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 TNNI3KQ59H18 835 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 VPS53Q5VIR6 699 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 MCTP1Q6DN14 999 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 MAP4K1Q92918 833 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 GRPEL1Q9HAV7 217 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 CWC25Q9NXE8 425 aaPredicted RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 HMG20BQ9P0W2 317 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 FPGT-TNNI3KV9GXZ4 949 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 WDR33Q9C0J8 1336 aaKnown RBP10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
PPP4R3A-212ENST00000557382 TOGARAM1Q9Y4F4 1720 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 ITGB4P16144 1822 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 MBD3O95983 291 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 EVA1CP58658 441 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 RNF20Q5VTR2 975 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 FAM43AQ8N2R8 423 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 CCDC8Q9H0W5 538 aaPredicted RBP10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 ZNF335Q9H4Z2 1342 aaPredicted RBP10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 MED23Q9ULK4 1368 aa10.75□□□□□ -0.69
PPP4R3A-212ENST00000557382 COL22A1Q8NFW1 1626 aaPredicted RBP10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 CIAO1O76071 339 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 AK2P54819 239 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 FOXO4P98177 505 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 PTH1RQ03431 593 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 NMIQ13287 307 aaPredicted RBP10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 ANKRD1Q15327 319 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 FSD1Q9BTV5 496 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 UPF3BQ9BZI7 483 aaKnown RBP10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 CYP46A1Q9Y6A2 500 aa10.74□□□□□ -0.69
PPP4R3A-212ENST00000557382 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 IL15P40933 162 aaPredicted RBP10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 TFCP2Q12800 502 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 PKP1Q13835 747 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 KRT32Q14532 448 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 RUFY3Q7L099 469 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 HAUS7Q99871 368 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 ISCA1Q9BUE6 129 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 PLA2G12BQ9BX93 195 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 SIL1Q9H173 461 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 PDRG1Q9NUG6 133 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 TMOD3Q9NYL9 352 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms