RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 NTSR2O95665 410 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 CRY2Q49AN0 593 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 CRAMP1Q96RY5 1269 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 ISCA1Q9BUE6 129 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-222ENST00000557356 PHAXQ9H814 394 aaKnown RBP10.04□□□□□ -0.8
PSEN1-222ENST00000557356 WWC3Q9ULE0 1092 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 RIC1Q4ADV7 1423 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 UBN2Q6ZU65 1347 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 ZNF521Q96K83 1311 aa10.04□□□□□ -0.8
PSEN1-222ENST00000557356 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
PSEN1-222ENST00000557356 CT47B1P0C2W7 299 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-222ENST00000557356 HOXA10P31260 410 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-222ENST00000557356 SLFN5Q08AF3 891 aa10.03□□□□□ -0.8
PSEN1-222ENST00000557356 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
PSEN1-222ENST00000557356 PI4KAP2A4QPH2 592 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 C21orf2O43822 256 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 BBOX1O75936 387 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 LMNB1P20700 586 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 FLIIQ13045 1269 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 CCDC93Q567U6 631 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 PI4KAP1Q8N8J0 262 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 ZBTB38Q8NAP3 1195 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-222ENST00000557356 CWC25Q9NXE8 425 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-222ENST00000557356 MAP3K2Q9Y2U5 619 aa10.02□□□□□ -0.81
PSEN1-222ENST00000557356 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
PSEN1-222ENST00000557356 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
PSEN1-222ENST00000557356 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
PSEN1-222ENST00000557356 PCCAP05165 728 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 ZNF784Q8NCA9 323 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 MYD88Q99836 296 aa10.01□□□□□ -0.81
PSEN1-222ENST00000557356 SPINK5Q9NQ38 1064 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 LTBP3Q9NS15 1303 aa10.01□□□□□ -0.81
PSEN1-222ENST00000557356 N4BP2Q86UW6 1770 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-222ENST00000557356 SF3B3Q15393 1217 aaKnown RBP10□□□□□ -0.81
PSEN1-222ENST00000557356 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 LINS1Q8NG48 757 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 DNAAF4Q8WXU2 420 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 VPS33BQ9H267 617 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 TAOK3Q9H2K8 898 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 NUP98P52948 1817 aa10□□□□□ -0.81
PSEN1-222ENST00000557356 CHD4Q14839 1912 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 IRS4O14654 1257 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-222ENST00000557356 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
PSEN1-222ENST00000557356 PDE8AO60658 829 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 HCLS1P14317 486 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-222ENST00000557356 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
PSEN1-222ENST00000557356 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 FAM89AQ96GI7 184 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-222ENST00000557356 RNF181Q9P0P0 153 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 KDM2BQ8NHM5 1336 aa9.99□□□□□ -0.81
PSEN1-222ENST00000557356 CCDC152Q4G0S7 254 aa9.98□□□□□ -0.81
PSEN1-222ENST00000557356 SP8Q8IXZ3 490 aa9.98□□□□□ -0.81
PSEN1-222ENST00000557356 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-222ENST00000557356 KIAA1551Q9HCM1 1747 aa9.98□□□□□ -0.81
PSEN1-222ENST00000557356 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
PSEN1-222ENST00000557356 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-222ENST00000557356 FKBP4Q02790 459 aaKnown RBP eCLIP9.97□□□□□ -0.81
PSEN1-222ENST00000557356 GRAPQ13588 217 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 G2E3Q7L622 706 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-222ENST00000557356 PSMD1Q99460 953 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 ATP6V0A2Q9Y487 856 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 ARFGEF1Q9Y6D6 1849 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 PTPRCP08575 1304 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 CDHR2Q9BYE9 1310 aa9.97□□□□□ -0.81
PSEN1-222ENST00000557356 H7C1W4 665 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 NFKBIEO00221 500 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 ALDH1L1O75891 902 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 HOXD11P31277 338 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-222ENST00000557356 RPS8P62241 208 aaKnown RBP9.96□□□□□ -0.82
PSEN1-222ENST00000557356 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.82
PSEN1-222ENST00000557356 GCKRQ14397 625 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 JDP2Q8WYK2 163 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 HDAC5Q9UQL6 1122 aa9.96□□□□□ -0.82
PSEN1-222ENST00000557356 BRCA1P38398 1863 aaKnown RBP9.96□□□□□ -0.82
PSEN1-222ENST00000557356 GLTPD2A6NH11 291 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 IPO8O15397 1037 aaKnown RBP9.95□□□□□ -0.82
PSEN1-222ENST00000557356 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-222ENST00000557356 SYNE4Q8N205 404 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 MPNDQ8N594 471 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 MRPL50Q8N5N7 158 aaKnown RBP9.95□□□□□ -0.82
PSEN1-222ENST00000557356 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
PSEN1-222ENST00000557356 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 ADCY9O60503 1353 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 251.9 ms