RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 WDR17Q8IZU2 1322 aa23.29■■□□□ 1.32
FOXN3-214ENST00000557258 TCEANC2Q96MN5 208 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 CRYBG1Q9Y4K1 1723 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 A0A0D9SFI3 127 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 KCNJ4P48050 445 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 CLEC17AQ6ZS10 378 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 HDAC5Q9UQL6 1122 aa23.28■■□□□ 1.32
FOXN3-214ENST00000557258 LARGE1O95461 756 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 MRE11P49959 708 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 EVA1CP58658 441 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 KLHL40Q2TBA0 621 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 GPT2Q8TD30 523 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
FOXN3-214ENST00000557258 CUL4AQ13619 759 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 EVI5LQ96CN4 794 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 TAF6LQ9Y6J9 622 aa23.27■■□□□ 1.32
FOXN3-214ENST00000557258 MCM2P49736 904 aa23.26■■□□□ 1.31
FOXN3-214ENST00000557258 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
FOXN3-214ENST00000557258 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
FOXN3-214ENST00000557258 RUFY3Q7L099 469 aa23.26■■□□□ 1.31
FOXN3-214ENST00000557258 DBNLQ9UJU6 430 aaKnown RBP23.26■■□□□ 1.31
FOXN3-214ENST00000557258 DNAJC2Q99543 621 aaKnown RBP23.26■■□□□ 1.31
FOXN3-214ENST00000557258 CPDO75976 1380 aa23.25■■□□□ 1.31
FOXN3-214ENST00000557258 CCDC85AQ96PX6 553 aaPredicted RBP23.25■■□□□ 1.31
FOXN3-214ENST00000557258 PCDH11XQ9BZA7 1347 aa23.24■■□□□ 1.31
FOXN3-214ENST00000557258 PCDH11YQ9BZA8 1340 aa23.24■■□□□ 1.31
FOXN3-214ENST00000557258 ZNF589Q86UQ0 364 aaPredicted RBP23.24■■□□□ 1.31
FOXN3-214ENST00000557258 SLFNL1Q499Z3 407 aa23.24■■□□□ 1.31
FOXN3-214ENST00000557258 RUFY2Q8WXA3 655 aa23.24■■□□□ 1.31
FOXN3-214ENST00000557258 IL2RBP14784 551 aa23.23■■□□□ 1.31
FOXN3-214ENST00000557258 RFX5P48382 616 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-214ENST00000557258 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
FOXN3-214ENST00000557258 RBM8AQ9Y5S9 174 aaKnown RBP23.23■■□□□ 1.31
FOXN3-214ENST00000557258 BRD1O95696 1058 aa23.23■■□□□ 1.31
FOXN3-214ENST00000557258 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
FOXN3-214ENST00000557258 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-214ENST00000557258 TTC14Q96N46 770 aa23.23■■□□□ 1.31
FOXN3-214ENST00000557258 RRAGDQ9NQL2 400 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-214ENST00000557258 XIRP1Q702N8 1843 aaKnown RBP23.22■■□□□ 1.31
FOXN3-214ENST00000557258 ZSCAN23Q3MJ62 389 aa23.22■■□□□ 1.31
FOXN3-214ENST00000557258 CCDC171Q6TFL3 1326 aa23.22■■□□□ 1.31
FOXN3-214ENST00000557258 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
FOXN3-214ENST00000557258 CCDC83Q8IWF9 413 aa23.21■■□□□ 1.31
FOXN3-214ENST00000557258 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
FOXN3-214ENST00000557258 COL5A2P05997 1499 aaPredicted RBP23.21■■□□□ 1.31
FOXN3-214ENST00000557258 CCDC129Q6ZRS4 1044 aa23.21■■□□□ 1.31
FOXN3-214ENST00000557258 SEC62Q99442 399 aaKnown RBP23.21■■□□□ 1.31
FOXN3-214ENST00000557258 KAT6BQ8WYB5 2073 aa23.2■■□□□ 1.31
FOXN3-214ENST00000557258 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
FOXN3-214ENST00000557258 NECAB1Q8N987 351 aa23.2■■□□□ 1.3
FOXN3-214ENST00000557258 NEUROD6Q96NK8 337 aa23.2■■□□□ 1.3
FOXN3-214ENST00000557258 MRC1P22897 1456 aa23.2■■□□□ 1.3
FOXN3-214ENST00000557258 SOS2Q07890 1332 aaPredicted RBP23.2■■□□□ 1.3
FOXN3-214ENST00000557258 PTMSP20962 102 aa23.2■■□□□ 1.3
FOXN3-214ENST00000557258 CREB3L3Q68CJ9 461 aa23.19■■□□□ 1.3
FOXN3-214ENST00000557258 COPRSQ9NQ92 184 aa23.19■■□□□ 1.3
FOXN3-214ENST00000557258 PDRG1Q9NUG6 133 aa23.19■■□□□ 1.3
FOXN3-214ENST00000557258 CASP7P55210 303 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 INTS4Q96HW7 963 aaKnown RBP23.18■■□□□ 1.3
FOXN3-214ENST00000557258 TMEM63CQ9P1W3 806 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 ASAP1Q9ULH1 1129 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 LIMCH1Q9UPQ0 1083 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 TIMM10P62072 90 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 LMTK3Q96Q04 1460 aa23.18■■□□□ 1.3
FOXN3-214ENST00000557258 NECTIN1Q15223 517 aa23.17■■□□□ 1.3
FOXN3-214ENST00000557258 PKD1L3Q7Z443 1732 aa23.17■■□□□ 1.3
FOXN3-214ENST00000557258 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
FOXN3-214ENST00000557258 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
FOXN3-214ENST00000557258 GADD45BO75293 160 aaPredicted RBP23.17■■□□□ 1.3
FOXN3-214ENST00000557258 FOXO4P98177 505 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 LRRC24Q50LG9 513 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 SYCE3A1L190 88 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 IL17RAQ96F46 866 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 RPAP1Q9BWH6 1393 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-214ENST00000557258 RABL6Q3YEC7 729 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-214ENST00000557258 CWC25Q9NXE8 425 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-214ENST00000557258 BTG4Q9NY30 223 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-214ENST00000557258 CYP46A1Q9Y6A2 500 aa23.16■■□□□ 1.3
FOXN3-214ENST00000557258 A0A0G2JS52 829 aa23.15■■□□□ 1.3
FOXN3-214ENST00000557258 SLC27A2O14975 620 aa23.15■■□□□ 1.3
FOXN3-214ENST00000557258 ZKSCAN1P17029 563 aaPredicted RBP23.15■■□□□ 1.3
FOXN3-214ENST00000557258 PRIM1P49642 420 aaKnown RBP23.15■■□□□ 1.3
FOXN3-214ENST00000557258 GLI3P10071 1580 aa23.15■■□□□ 1.3
FOXN3-214ENST00000557258 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
FOXN3-214ENST00000557258 CARD10Q9BWT7 1032 aa23.15■■□□□ 1.3
FOXN3-214ENST00000557258 PUS3Q9BZE2 481 aaKnown RBP23.15■■□□□ 1.3
FOXN3-214ENST00000557258 ARFGEF2Q9Y6D5 1785 aa23.14■■□□□ 1.3
FOXN3-214ENST00000557258 NASPP49321 788 aaPredicted RBP23.14■■□□□ 1.29
FOXN3-214ENST00000557258 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 ME3Q16798 604 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 SYNE4Q8N205 404 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 MAP4K1Q92918 833 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 SMC3Q9UQE7 1217 aa23.14■■□□□ 1.29
FOXN3-214ENST00000557258 COL15A1P39059 1388 aa23.13■■□□□ 1.29
FOXN3-214ENST00000557258 SYT1P21579 422 aa23.13■■□□□ 1.29
FOXN3-214ENST00000557258 ST3GAL1Q11201 340 aa23.13■■□□□ 1.29
FOXN3-214ENST00000557258 STK3Q13188 491 aa23.13■■□□□ 1.29
FOXN3-214ENST00000557258 DNAJC10Q8IXB1 793 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 1469.8 ms