RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 PCSK7Q16549 785 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 SH3PXD2AQ5TCZ1 1133 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 NFATC2IPQ8NCF5 419 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 TPCN2Q8NHX9 752 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 C7orf43Q8WVR3 580 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 SUSD3Q96L08 255 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 PCMTD2Q9NV79 361 aa4.57□□□□□ -1.68
PTPN21-209ENST00000557249 PAX4O43316 350 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 PPP1R12BO60237 982 aaPredicted RBP4.56□□□□□ -1.68
PTPN21-209ENST00000557249 AFF1P51825 1210 aaKnown RBP4.56□□□□□ -1.68
PTPN21-209ENST00000557249 EPHA4P54764 986 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 CCDC102BQ68D86 513 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 DEPDC4Q8N2C3 294 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 ZNF280CQ8ND82 737 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 TSPAN10Q9H1Z9 355 aaPredicted RBP4.56□□□□□ -1.68
PTPN21-209ENST00000557249 DNAJB12Q9NXW2 375 aaKnown RBP4.56□□□□□ -1.68
PTPN21-209ENST00000557249 RNF112Q9ULX5 631 aa4.56□□□□□ -1.68
PTPN21-209ENST00000557249 USP17L5A8MUK1 530 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 TXKP42681 527 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 IREB2P48200 963 aaKnown RBP4.55□□□□□ -1.68
PTPN21-209ENST00000557249 HIRAP54198 1017 aaPredicted RBP4.55□□□□□ -1.68
PTPN21-209ENST00000557249 MCTP1Q6DN14 999 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 BTLAQ7Z6A9 289 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 DTWD1Q8N5C7 304 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 WFDC12Q8WWY7 111 aa4.55□□□□□ -1.68
PTPN21-209ENST00000557249 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.55□□□□□ -1.68
PTPN21-209ENST00000557249 EPB42P16452 691 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 NFKB1P19838 968 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 CCINQ13939 588 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 MSL1Q68DK7 614 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 FAM35AQ86V20 835 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 WFDC8Q8IUA0 241 aa4.54□□□□□ -1.68
PTPN21-209ENST00000557249 SSBP4Q9BWG4 385 aaPredicted RBP4.54□□□□□ -1.68
PTPN21-209ENST00000557249 CPB1P15086 417 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 ARID4AP29374 1257 aaPredicted RBP4.53□□□□□ -1.68
PTPN21-209ENST00000557249 ELMSAN1Q6PJG2 1045 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 IGF2-ASQ6U949 168 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 SLC51AQ86UW1 340 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 FBXO11Q86XK2 927 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 ALDH16A1Q8IZ83 802 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 CHMP7Q8WUX9 453 aaPredicted RBP4.53□□□□□ -1.68
PTPN21-209ENST00000557249 NGLY1Q96IV0 654 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 ALG2Q9H553 416 aa4.53□□□□□ -1.68
PTPN21-209ENST00000557249 PALM3A6NDB9 673 aaPredicted RBP4.52□□□□□ -1.69
PTPN21-209ENST00000557249 M0R2N6 131 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 PTCD1O75127 700 aaKnown RBP4.52□□□□□ -1.69
PTPN21-209ENST00000557249 COBLO75128 1261 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 IRAK1P51617 712 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 PRR23CQ6ZRP0 262 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 LARGE2Q8N3Y3 721 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 GSX2Q9BZM3 304 aa4.52□□□□□ -1.69
PTPN21-209ENST00000557249 ZBTB7BO15156 539 aaPredicted RBP4.51□□□□□ -1.69
PTPN21-209ENST00000557249 NOS3P29474 1203 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 SSTR4P31391 388 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 TPRNQ4KMQ1 711 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 OGFOD1Q8N543 542 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 GAS2L2Q8NHY3 880 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 FRRS1LQ9P0K9 344 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 NAGPAQ9UK23 515 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 ATAD2Q6PL18 1390 aa4.51□□□□□ -1.69
PTPN21-209ENST00000557249 COL17A1Q9UMD9 1497 aaPredicted RBP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 USP17L3A6NCW0 530 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 USP17L4A6NCW7 530 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 RAD21O60216 631 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 YBX3P16989 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 CLDN10P78369 228 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 MCM6Q14566 821 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 IER5Q5VY09 327 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 USP17L2Q6R6M4 530 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 POTEAQ6S8J7 498 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 USP17L1Q7RTZ2 530 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 PLEKHM2Q8IWE5 1019 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 STAG2Q8N3U4 1231 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 TSEN2Q8NCE0 465 aaKnown RBP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 DCAF11Q8TEB1 546 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 SCG3Q8WXD2 468 aaKnown RBP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 ZNF594Q96JF6 807 aaPredicted RBP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 MEGF10Q96KG7 1140 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 AKTIPQ9H8T0 292 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 MKRN1Q9UHC7 482 aaKnown RBP4.5□□□□□ -1.69
PTPN21-209ENST00000557249 KIAA1024Q9UPX6 916 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 COG6Q9Y2V7 657 aa4.5□□□□□ -1.69
PTPN21-209ENST00000557249 TGFBR3LH3BV60 316 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 MAP3K6O95382 1288 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 FSTP19883 344 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 RTN1Q16799 776 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 PERM1Q5SV97 790 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 DHX32Q7L7V1 743 aaKnown RBP4.49□□□□□ -1.69
PTPN21-209ENST00000557249 KRT25Q7Z3Z0 450 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 LPIN3Q9BQK8 851 aa4.49□□□□□ -1.69
PTPN21-209ENST00000557249 C2orf49Q9BVC5 232 aaPredicted RBP4.49□□□□□ -1.69
PTPN21-209ENST00000557249 GSC2O15499 205 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 RARAP10276 462 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 MLLT1Q03111 559 aaPredicted RBP4.48□□□□□ -1.69
PTPN21-209ENST00000557249 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 TTC9Q92623 222 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 HINFPQ9BQA5 517 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
PTPN21-209ENST00000557249 MRPL18Q9H0U6 180 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms