RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 SUSD3Q96L08 255 aa7.06□□□□□ -1.28
SRP54-212ENST00000556992 USP17L3A6NCW0 530 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 USP17L4A6NCW7 530 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
SRP54-212ENST00000556992 USP17L2Q6R6M4 530 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 USP17L1Q7RTZ2 530 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 NFATC2IPQ8NCF5 419 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
SRP54-212ENST00000556992 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 UBE2OQ9C0C9 1292 aaKnown RBP7.05□□□□□ -1.28
SRP54-212ENST00000556992 KCNH4Q9UQ05 1017 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 HMGXB3Q12766 1538 aa7.05□□□□□ -1.28
SRP54-212ENST00000556992 SELPP16109 830 aa7.04□□□□□ -1.28
SRP54-212ENST00000556992 NGLY1Q96IV0 654 aa7.04□□□□□ -1.28
SRP54-212ENST00000556992 WRNQ14191 1432 aaPredicted RBP eCLIP7.03□□□□□ -1.28
SRP54-212ENST00000556992 C21orf2O43822 256 aa7.03□□□□□ -1.28
SRP54-212ENST00000556992 PPP1R12BO60237 982 aaPredicted RBP7.03□□□□□ -1.28
SRP54-212ENST00000556992 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
SRP54-212ENST00000556992 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
SRP54-212ENST00000556992 JPH1Q9HDC5 661 aaPredicted RBP7.03□□□□□ -1.28
SRP54-212ENST00000556992 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
SRP54-212ENST00000556992 NAGPAQ9UK23 515 aa7.03□□□□□ -1.28
SRP54-212ENST00000556992 A0A0A0MRY4 1105 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 LILRB5O75023 590 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 ALDH16A1Q8IZ83 802 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 CHMP7Q8WUX9 453 aaPredicted RBP7.02□□□□□ -1.29
SRP54-212ENST00000556992 SLC6A14Q9UN76 642 aa7.02□□□□□ -1.29
SRP54-212ENST00000556992 GPC6Q9Y625 555 aaPredicted RBP7.02□□□□□ -1.29
SRP54-212ENST00000556992 CADPSQ9ULU8 1353 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 C1orf53Q5VUE5 145 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 NACC1Q96RE7 527 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 ZFP64Q9NPA5 681 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
SRP54-212ENST00000556992 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 EEA1Q15075 1411 aa7.01□□□□□ -1.29
SRP54-212ENST00000556992 CFTRP13569 1480 aa7□□□□□ -1.29
SRP54-212ENST00000556992 ERCC6Q03468 1493 aa7□□□□□ -1.29
SRP54-212ENST00000556992 ATP1A2P50993 1020 aa7□□□□□ -1.29
SRP54-212ENST00000556992 KCNQ4P56696 695 aa7□□□□□ -1.29
SRP54-212ENST00000556992 ADGRE1Q14246 886 aa7□□□□□ -1.29
SRP54-212ENST00000556992 ARTNQ5T4W7 220 aa7□□□□□ -1.29
SRP54-212ENST00000556992 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
SRP54-212ENST00000556992 ANKIB1Q9P2G1 1089 aa7□□□□□ -1.29
SRP54-212ENST00000556992 DKK1O94907 266 aa6.99□□□□□ -1.29
SRP54-212ENST00000556992 HIRAP54198 1017 aaPredicted RBP6.99□□□□□ -1.29
SRP54-212ENST00000556992 PSAPL1Q6NUJ1 521 aa6.99□□□□□ -1.29
SRP54-212ENST00000556992 POTEAQ6S8J7 498 aa6.99□□□□□ -1.29
SRP54-212ENST00000556992 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
SRP54-212ENST00000556992 DMRTC2Q8IXT2 367 aaPredicted RBP6.99□□□□□ -1.29
SRP54-212ENST00000556992 SCG3Q8WXD2 468 aaKnown RBP6.99□□□□□ -1.29
SRP54-212ENST00000556992 DNAJB12Q9NXW2 375 aaKnown RBP6.99□□□□□ -1.29
SRP54-212ENST00000556992 ATAD2Q6PL18 1390 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 C9orf172C9J069 976 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 ATP9BO43861 1147 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 NFKB1P19838 968 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
SRP54-212ENST00000556992 NRG1Q02297 640 aaPredicted RBP6.98□□□□□ -1.29
SRP54-212ENST00000556992 PLAURQ03405 335 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 TP53INP1Q96A56 240 aa6.98□□□□□ -1.29
SRP54-212ENST00000556992 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
SRP54-212ENST00000556992 ELNP15502 786 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
SRP54-212ENST00000556992 KRT25Q7Z3Z0 450 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 TXNRD3Q86VQ6 643 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 LARGE2Q8N3Y3 721 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 C2orf49Q9BVC5 232 aaPredicted RBP6.97□□□□□ -1.29
SRP54-212ENST00000556992 USP21Q9UK80 565 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 BCS1LQ9Y276 419 aa6.97□□□□□ -1.29
SRP54-212ENST00000556992 SOGA1O94964 1423 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 RAD21O60216 631 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 CPB1P15086 417 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 RASA1P20936 1047 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
SRP54-212ENST00000556992 SIX5Q8N196 739 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 PNMA5Q96PV4 448 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
SRP54-212ENST00000556992 ABCC8Q09428 1581 aa6.95□□□□□ -1.3
SRP54-212ENST00000556992 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
SRP54-212ENST00000556992 RAC1P63000 192 aa6.95□□□□□ -1.3
SRP54-212ENST00000556992 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
SRP54-212ENST00000556992 KRTAP1-3Q8IUG1 177 aa6.95□□□□□ -1.3
SRP54-212ENST00000556992 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
SRP54-212ENST00000556992 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
SRP54-212ENST00000556992 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
SRP54-212ENST00000556992 M0R2N6 131 aa6.94□□□□□ -1.3
SRP54-212ENST00000556992 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
SRP54-212ENST00000556992 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
SRP54-212ENST00000556992 FAM35AQ86V20 835 aa6.94□□□□□ -1.3
SRP54-212ENST00000556992 KLK14Q9P0G3 267 aa6.94□□□□□ -1.3
SRP54-212ENST00000556992 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
SRP54-212ENST00000556992 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
SRP54-212ENST00000556992 CCINQ13939 588 aa6.93□□□□□ -1.3
SRP54-212ENST00000556992 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms