RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 NPR1P16066 1061 aa17.02■□□□□ 0.32
PSEN1-219ENST00000556951 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-219ENST00000556951 TEFQ10587 303 aa17.02■□□□□ 0.32
PSEN1-219ENST00000556951 TRIOBPQ9H2D6 2365 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-219ENST00000556951 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 GPC2Q8N158 579 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
PSEN1-219ENST00000556951 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-219ENST00000556951 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-219ENST00000556951 SYNE4Q8N205 404 aa17■□□□□ 0.31
PSEN1-219ENST00000556951 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
PSEN1-219ENST00000556951 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
PSEN1-219ENST00000556951 NPHP1O15259 732 aa16.99■□□□□ 0.31
PSEN1-219ENST00000556951 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
PSEN1-219ENST00000556951 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-219ENST00000556951 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
PSEN1-219ENST00000556951 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-219ENST00000556951 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
PSEN1-219ENST00000556951 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
PSEN1-219ENST00000556951 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
PSEN1-219ENST00000556951 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
PSEN1-219ENST00000556951 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
PSEN1-219ENST00000556951 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
PSEN1-219ENST00000556951 RNF186Q9NXI6 227 aa16.97■□□□□ 0.31
PSEN1-219ENST00000556951 TRPA1O75762 1119 aa16.96■□□□□ 0.31
PSEN1-219ENST00000556951 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
PSEN1-219ENST00000556951 MIER1Q8N108 512 aa16.96■□□□□ 0.31
PSEN1-219ENST00000556951 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
PSEN1-219ENST00000556951 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
PSEN1-219ENST00000556951 COL4A5P29400 1685 aa16.96■□□□□ 0.31
PSEN1-219ENST00000556951 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
PSEN1-219ENST00000556951 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
PSEN1-219ENST00000556951 HLFQ16534 295 aa16.95■□□□□ 0.3
PSEN1-219ENST00000556951 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
PSEN1-219ENST00000556951 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
PSEN1-219ENST00000556951 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
PSEN1-219ENST00000556951 EPS15P42566 896 aa16.94■□□□□ 0.3
PSEN1-219ENST00000556951 PSMD1Q99460 953 aa16.94■□□□□ 0.3
PSEN1-219ENST00000556951 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
PSEN1-219ENST00000556951 FAM177BA6PVY3 158 aa16.93■□□□□ 0.3
PSEN1-219ENST00000556951 RGL2O15211 777 aa16.93■□□□□ 0.3
PSEN1-219ENST00000556951 SCNN1DP51172 638 aa16.93■□□□□ 0.3
PSEN1-219ENST00000556951 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
PSEN1-219ENST00000556951 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
PSEN1-219ENST00000556951 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
PSEN1-219ENST00000556951 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
PSEN1-219ENST00000556951 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
PSEN1-219ENST00000556951 FAM155AB1AL88 458 aaPredicted RBP16.91■□□□□ 0.3
PSEN1-219ENST00000556951 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
PSEN1-219ENST00000556951 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
PSEN1-219ENST00000556951 CEP290O15078 2479 aa16.91■□□□□ 0.3
PSEN1-219ENST00000556951 KIF23Q02241 960 aaPredicted RBP16.9■□□□□ 0.3
PSEN1-219ENST00000556951 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
PSEN1-219ENST00000556951 ANP32CO43423 234 aa16.89■□□□□ 0.29
PSEN1-219ENST00000556951 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
PSEN1-219ENST00000556951 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
PSEN1-219ENST00000556951 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-219ENST00000556951 EIF6P56537 245 aaKnown RBP16.88■□□□□ 0.29
PSEN1-219ENST00000556951 HUNKP57058 714 aa16.88■□□□□ 0.29
PSEN1-219ENST00000556951 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
PSEN1-219ENST00000556951 GLIS2Q9BZE0 524 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-219ENST00000556951 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
PSEN1-219ENST00000556951 ABCC12Q96J65 1359 aa16.88■□□□□ 0.29
PSEN1-219ENST00000556951 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
PSEN1-219ENST00000556951 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
PSEN1-219ENST00000556951 MCM10Q7L590 875 aa16.87■□□□□ 0.29
PSEN1-219ENST00000556951 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
PSEN1-219ENST00000556951 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
PSEN1-219ENST00000556951 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
PSEN1-219ENST00000556951 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
PSEN1-219ENST00000556951 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 CCDC102AQ96A19 550 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
PSEN1-219ENST00000556951 UNC80Q8N2C7 3258 aa16.84■□□□□ 0.29
PSEN1-219ENST00000556951 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
PSEN1-219ENST00000556951 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-219ENST00000556951 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
PSEN1-219ENST00000556951 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
PSEN1-219ENST00000556951 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
PSEN1-219ENST00000556951 HTTP42858 3142 aa16.83■□□□□ 0.29
PSEN1-219ENST00000556951 ERVV-1B6SEH8 477 aa16.83■□□□□ 0.28
PSEN1-219ENST00000556951 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PSEN1-219ENST00000556951 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
PSEN1-219ENST00000556951 GPRC5DQ9NZD1 345 aa16.83■□□□□ 0.28
PSEN1-219ENST00000556951 CENPFP49454 3210 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 UBN2Q6ZU65 1347 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
PSEN1-219ENST00000556951 CXCL9Q07325 125 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 ZNF296Q8WUU4 475 aaPredicted RBP16.82■□□□□ 0.28
PSEN1-219ENST00000556951 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms