RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 AKAP12Q02952 1782 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 GIGYF2Q6Y7W6 1299 aaKnown RBP7.2□□□□□ -1.26
ATXN3-244ENST00000556898 ITSN1Q15811 1721 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 MON2Q7Z3U7 1717 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 NRKQ7Z2Y5 1582 aa7.2□□□□□ -1.26
ATXN3-244ENST00000556898 TTLL12Q14166 644 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-244ENST00000556898 TRIM46Q7Z4K8 759 aa7.19□□□□□ -1.26
ATXN3-244ENST00000556898 RETREG3Q86VR2 466 aa7.19□□□□□ -1.26
ATXN3-244ENST00000556898 NUDT12Q9BQG2 462 aa7.19□□□□□ -1.26
ATXN3-244ENST00000556898 PRDM11Q9NQV5 511 aa7.19□□□□□ -1.26
ATXN3-244ENST00000556898 EDC4Q6P2E9 1401 aaKnown RBP7.18□□□□□ -1.26
ATXN3-244ENST00000556898 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
ATXN3-244ENST00000556898 BMP1P13497 986 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 PPP2R1AP30153 589 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 SH3BP2P78314 561 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 MORC1Q86VD1 984 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 STK17AQ9UEE5 414 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 CGNL1Q0VF96 1302 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
ATXN3-244ENST00000556898 KIF1AQ12756 1690 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 FDX1P10109 184 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 NDUFV2P19404 249 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-244ENST00000556898 NUTM1Q86Y26 1132 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
ATXN3-244ENST00000556898 GPBP1L1Q9HC44 474 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-244ENST00000556898 PIK3C2AO00443 1686 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 TRPM3Q9HCF6 1732 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-244ENST00000556898 KIF20BQ96Q89 1820 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 RALBP1Q15311 655 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 ABTB2Q8N961 1025 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-244ENST00000556898 EHBP1Q8NDI1 1231 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 MYBBP1AQ9BQG0 1328 aaKnown RBP7.16□□□□□ -1.26
ATXN3-244ENST00000556898 NPC1L1Q9UHC9 1359 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 OVOS2A0A0J9YW53 1432 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 OVOS2Q6IE36 1432 aa7.16□□□□□ -1.26
ATXN3-244ENST00000556898 SENP3-EIF4A1A0A087X0R7 540 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 C6orf229H3BNL8 230 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 MS4A1P11836 297 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-244ENST00000556898 RRS1Q15050 365 aaKnown RBP7.15□□□□□ -1.26
ATXN3-244ENST00000556898 NEUROD2Q15784 382 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 COG3Q96JB2 828 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 TTC21AQ8NDW8 1320 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 USP31Q70CQ4 1352 aa7.15□□□□□ -1.26
ATXN3-244ENST00000556898 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-244ENST00000556898 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-244ENST00000556898 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 CCER2I3L3R5 266 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 CAPN5O15484 640 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-244ENST00000556898 NSD2O96028 1365 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 SSTR3P32745 418 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-244ENST00000556898 VEGFBP49765 207 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-244ENST00000556898 BAP1Q92560 729 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 MRS2Q9HD23 443 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-244ENST00000556898 EMILIN1Q9Y6C2 1016 aa7.14□□□□□ -1.27
ATXN3-244ENST00000556898 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 ANKRD26Q9UPS8 1709 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 CCNYL3P0C7X3 344 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 GMPRP36959 345 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 MTHFSP49914 203 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 LINC01559Q495D7 138 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 UNC93B1Q9H1C4 597 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 EVA1BQ9NVM1 165 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 POLKQ9UBT6 870 aa7.13□□□□□ -1.27
ATXN3-244ENST00000556898 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 PPM1GO15355 546 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-244ENST00000556898 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
ATXN3-244ENST00000556898 NLRP13Q86W25 1043 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 FAM9BQ8IZU0 186 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
ATXN3-244ENST00000556898 TLL2Q9Y6L7 1015 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 WASF2Q9Y6W5 498 aa7.12□□□□□ -1.27
ATXN3-244ENST00000556898 SLIT3O75094 1523 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 BRD4O60885 1362 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-244ENST00000556898 USP19O94966 1318 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 MAP3K19Q56UN5 1328 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 PEAK1Q9H792 1746 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 DDRGK1Q96HY6 314 aa7.11□□□□□ -1.27
ATXN3-244ENST00000556898 YTHDC1Q96MU7 727 aaKnown RBP7.11□□□□□ -1.27
ATXN3-244ENST00000556898 COL3A1P02461 1466 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-244ENST00000556898 AATKQ6ZMQ8 1374 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms