RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 ADCY9O60503 1353 aa9.47□□□□□ -0.89
PCNX1-213ENST00000556846 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 PRR5LQ6MZQ0 368 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
PCNX1-213ENST00000556846 CNBD1Q8NA66 436 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 PLEKHF1Q96S99 279 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 BRIP1Q9BX63 1249 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 CARMIL3Q8ND23 1372 aa9.46□□□□□ -0.9
PCNX1-213ENST00000556846 ADAMTS7Q9UKP4 1686 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-213ENST00000556846 RIPK4P57078 832 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 CLEC4GQ6UXB4 293 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 NBPF5PQ86XG9 351 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-213ENST00000556846 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
PCNX1-213ENST00000556846 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 RRP7AQ9Y3A4 280 aaKnown RBP9.45□□□□□ -0.9
PCNX1-213ENST00000556846 KDM2BQ8NHM5 1336 aa9.45□□□□□ -0.9
PCNX1-213ENST00000556846 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-213ENST00000556846 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 KIF3CO14782 793 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 TOMM70O94826 608 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 RASSF7Q02833 373 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCNX1-213ENST00000556846 VARS2Q5ST30 1063 aaKnown RBP9.44□□□□□ -0.9
PCNX1-213ENST00000556846 NBPF10Q6P3W6 841 aaKnown RBP9.44□□□□□ -0.9
PCNX1-213ENST00000556846 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 NBPF15Q8N660 670 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 NMRK2Q9NPI5 230 aa9.44□□□□□ -0.9
PCNX1-213ENST00000556846 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCNX1-213ENST00000556846 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 C21orf2O43822 256 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 MYL6BP14649 208 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 LMNB1P20700 586 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
PCNX1-213ENST00000556846 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 KIF6Q6ZMV9 814 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 RRAGCQ9HB90 399 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
PCNX1-213ENST00000556846 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
PCNX1-213ENST00000556846 HSPA6P17066 643 aa9.42□□□□□ -0.9
PCNX1-213ENST00000556846 EIF2S2P20042 333 aaKnown RBP9.42□□□□□ -0.9
PCNX1-213ENST00000556846 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
PCNX1-213ENST00000556846 MASTLQ96GX5 879 aa9.42□□□□□ -0.9
PCNX1-213ENST00000556846 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
PCNX1-213ENST00000556846 SRGNP10124 158 aa9.41□□□□□ -0.9
PCNX1-213ENST00000556846 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
PCNX1-213ENST00000556846 HLFQ16534 295 aa9.41□□□□□ -0.9
PCNX1-213ENST00000556846 STYK1Q6J9G0 422 aa9.41□□□□□ -0.9
PCNX1-213ENST00000556846 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
PCNX1-213ENST00000556846 UBR2Q8IWV8 1755 aa9.41□□□□□ -0.9
PCNX1-213ENST00000556846 KIAA1551Q9HCM1 1747 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 ERVV-1B6SEH8 477 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 RGL2O15211 777 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 ERFEQ4G0M1 354 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
PCNX1-213ENST00000556846 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 ZBTB3Q9H5J0 574 aa9.4□□□□□ -0.9
PCNX1-213ENST00000556846 NPR1P16066 1061 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 ALDH1B1P30837 517 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 TTLL7Q6ZT98 887 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
PCNX1-213ENST00000556846 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 NYXQ9GZU5 481 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 TAOK3Q9H2K8 898 aa9.39□□□□□ -0.91
PCNX1-213ENST00000556846 VIRMAQ69YN4 1812 aaKnown RBP9.38□□□□□ -0.91
PCNX1-213ENST00000556846 MAP3K15Q6ZN16 1313 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
PCNX1-213ENST00000556846 SIPA1L3O60292 1781 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-213ENST00000556846 GLTPD2A6NH11 291 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 NFKBIEO00221 500 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 VEGFAP15692 232 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-213ENST00000556846 GPTP24298 496 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 APLP1P51693 650 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 PRELPP51888 382 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
PCNX1-213ENST00000556846 FSTL1Q12841 308 aa9.37□□□□□ -0.91
PCNX1-213ENST00000556846 AIMP1Q12904 312 aaKnown RBP9.37□□□□□ -0.91
PCNX1-213ENST00000556846 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
PCNX1-213ENST00000556846 RPGRQ92834 1020 aaKnown RBP9.37□□□□□ -0.91
PCNX1-213ENST00000556846 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 UTRNP46939 3433 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 KLRG2A4D1S0 409 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-213ENST00000556846 SUSD4Q5VX71 490 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
PCNX1-213ENST00000556846 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 RTKN2Q8IZC4 609 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 SMC1BQ8NDV3 1235 aa9.36□□□□□ -0.91
PCNX1-213ENST00000556846 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-213ENST00000556846 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-213ENST00000556846 NRXN2Q9P2S2 1712 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms