RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
PRKCH-222ENST00000556778 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.58
PRKCH-222ENST00000556778 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
PRKCH-222ENST00000556778 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 FAM177BA6PVY3 158 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 SEC24BO95487 1268 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 G2E3Q7L622 706 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
PRKCH-222ENST00000556778 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRKCH-222ENST00000556778 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
PRKCH-222ENST00000556778 SERPINB2P05120 415 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 HOXB7P09629 217 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 GPTP24298 496 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 TRMT2AQ8IZ69 625 aaKnown RBP11.38□□□□□ -0.59
PRKCH-222ENST00000556778 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 DBF4Q9UBU7 674 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-222ENST00000556778 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-222ENST00000556778 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
PRKCH-222ENST00000556778 MAP3K15Q6ZN16 1313 aa11.37□□□□□ -0.59
PRKCH-222ENST00000556778 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
PRKCH-222ENST00000556778 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
PRKCH-222ENST00000556778 ERBB4Q15303 1308 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 E9PSI1 815 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 PLCG2P16885 1265 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 KIF6Q6ZMV9 814 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
PRKCH-222ENST00000556778 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRKCH-222ENST00000556778 VIRMAQ69YN4 1812 aaKnown RBP11.36□□□□□ -0.59
PRKCH-222ENST00000556778 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 CHRNA5P30532 468 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 CLEC4GQ6UXB4 293 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
PRKCH-222ENST00000556778 HYPKQ9NX55 129 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
PRKCH-222ENST00000556778 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 DPEP1P16444 411 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 PRR5LQ6MZQ0 368 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
PRKCH-222ENST00000556778 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 LRP5O75197 1615 aa11.34□□□□□ -0.59
PRKCH-222ENST00000556778 STK25O00506 426 aa11.33□□□□□ -0.6
PRKCH-222ENST00000556778 KCNA3P22001 575 aa11.33□□□□□ -0.6
PRKCH-222ENST00000556778 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
PRKCH-222ENST00000556778 JARID2Q92833 1246 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-222ENST00000556778 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
PRKCH-222ENST00000556778 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
PRKCH-222ENST00000556778 ZNF652Q9Y2D9 606 aa11.33□□□□□ -0.6
PRKCH-222ENST00000556778 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 RIC3Q7Z5B4 369 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-222ENST00000556778 SSH1Q8WYL5 1049 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
PRKCH-222ENST00000556778 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 F6X3S4 739 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRKCH-222ENST00000556778 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-222ENST00000556778 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 NLRP10Q86W26 655 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
PRKCH-222ENST00000556778 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 MYD88Q99836 296 aa11.31□□□□□ -0.6
PRKCH-222ENST00000556778 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 FLIIQ13045 1269 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 KSR2Q6VAB6 950 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
PRKCH-222ENST00000556778 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
PRKCH-222ENST00000556778 ADCY9O60503 1353 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 NPHP1O15259 732 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 NTSR2O95665 410 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 TGFB2P61812 414 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
PRKCH-222ENST00000556778 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
PRKCH-222ENST00000556778 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
PRKCH-222ENST00000556778 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-222ENST00000556778 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-222ENST00000556778 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-222ENST00000556778 GPR162Q16538 588 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms