RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 DALRD3Q5D0E6 543 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 C2CD5Q86YS7 1000 aa13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-214ENST00000556771 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 NTSR2O95665 410 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 CHRNA5P30532 468 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 STYK1Q6J9G0 422 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 NLRP10Q86W26 655 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
MTHFD1-214ENST00000556771 CHD4Q14839 1912 aa13.52□□□□□ -0.24
MTHFD1-214ENST00000556771 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 TRMT2AQ8IZ69 625 aaKnown RBP13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
MTHFD1-214ENST00000556771 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-214ENST00000556771 SRGNP10124 158 aa13.51□□□□□ -0.25
MTHFD1-214ENST00000556771 FLIIQ13045 1269 aa13.51□□□□□ -0.25
MTHFD1-214ENST00000556771 CNKSR1Q969H4 720 aa13.51□□□□□ -0.25
MTHFD1-214ENST00000556771 METTL22Q9BUU2 404 aaPredicted RBP13.51□□□□□ -0.25
MTHFD1-214ENST00000556771 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 NPR1P16066 1061 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 NEXNQ0ZGT2 675 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 ERFEQ4G0M1 354 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 CCDC191Q8NCU4 936 aa13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 ZNF622Q969S3 477 aaKnown RBP eCLIP13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 TRMT112Q9UI30 125 aaKnown RBP13.5□□□□□ -0.25
MTHFD1-214ENST00000556771 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 FKBP5Q13451 457 aaPredicted RBP13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
MTHFD1-214ENST00000556771 ADCY9O60503 1353 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 G2E3Q7L622 706 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 MYD88Q99836 296 aa13.48□□□□□ -0.25
MTHFD1-214ENST00000556771 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 ZBED9Q6R2W3 1325 aa13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 ABCB7O75027 752 aa13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 YY1P25490 414 aa13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 DNAAF4Q8WXU2 420 aa13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-214ENST00000556771 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-214ENST00000556771 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-214ENST00000556771 ARHGAP27Q6ZUM4 889 aa13.46□□□□□ -0.25
MTHFD1-214ENST00000556771 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
MTHFD1-214ENST00000556771 LAMB2P55268 1798 aa13.45□□□□□ -0.26
MTHFD1-214ENST00000556771 PTPRCP08575 1304 aa13.45□□□□□ -0.26
MTHFD1-214ENST00000556771 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
MTHFD1-214ENST00000556771 LINS1Q8NG48 757 aa13.45□□□□□ -0.26
MTHFD1-214ENST00000556771 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-214ENST00000556771 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
MTHFD1-214ENST00000556771 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
MTHFD1-214ENST00000556771 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 IRS4O14654 1257 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 HCLS1P14317 486 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 CACNA1SQ13698 1873 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
MTHFD1-214ENST00000556771 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 C21orf2O43822 256 aa13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
MTHFD1-214ENST00000556771 PDE8AO60658 829 aa13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 GCKRQ14397 625 aa13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms