RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 LILRB5O75023 590 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 NUDT8Q8WV74 236 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
PRPF39-210ENST00000556718 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
PRPF39-210ENST00000556718 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 SLC6A14Q9UN76 642 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
PRPF39-210ENST00000556718 A0A0A0MRY4 1105 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 SHISA2Q6UWI4 295 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 BTLAQ7Z6A9 289 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 ALDH16A1Q8IZ83 802 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
PRPF39-210ENST00000556718 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
PRPF39-210ENST00000556718 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
PRPF39-210ENST00000556718 MBTPS1Q14703 1052 aa8.66□□□□□ -1.02
PRPF39-210ENST00000556718 SIX5Q8N196 739 aa8.66□□□□□ -1.02
PRPF39-210ENST00000556718 JPH1Q9HDC5 661 aaPredicted RBP8.66□□□□□ -1.02
PRPF39-210ENST00000556718 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
PRPF39-210ENST00000556718 C9orf172C9J069 976 aa8.65□□□□□ -1.02
PRPF39-210ENST00000556718 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
PRPF39-210ENST00000556718 C2orf49Q9BVC5 232 aaPredicted RBP8.65□□□□□ -1.02
PRPF39-210ENST00000556718 NAGPAQ9UK23 515 aa8.65□□□□□ -1.02
PRPF39-210ENST00000556718 RAD21O60216 631 aa8.64□□□□□ -1.03
PRPF39-210ENST00000556718 LGR5O75473 907 aa8.64□□□□□ -1.03
PRPF39-210ENST00000556718 ELNP15502 786 aa8.64□□□□□ -1.03
PRPF39-210ENST00000556718 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
PRPF39-210ENST00000556718 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
PRPF39-210ENST00000556718 SCG3Q8WXD2 468 aaKnown RBP8.64□□□□□ -1.03
PRPF39-210ENST00000556718 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
PRPF39-210ENST00000556718 AFF1P51825 1210 aaKnown RBP8.63□□□□□ -1.03
PRPF39-210ENST00000556718 PSAPL1Q6NUJ1 521 aa8.63□□□□□ -1.03
PRPF39-210ENST00000556718 CHMP7Q8WUX9 453 aaPredicted RBP8.63□□□□□ -1.03
PRPF39-210ENST00000556718 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
PRPF39-210ENST00000556718 UBTFP17480 764 aaKnown RBP8.62□□□□□ -1.03
PRPF39-210ENST00000556718 GRNP28799 593 aaKnown RBP8.62□□□□□ -1.03
PRPF39-210ENST00000556718 ILDR2Q71H61 639 aa8.62□□□□□ -1.03
PRPF39-210ENST00000556718 DMRTC2Q8IXT2 367 aaPredicted RBP8.62□□□□□ -1.03
PRPF39-210ENST00000556718 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
PRPF39-210ENST00000556718 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
PRPF39-210ENST00000556718 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
PRPF39-210ENST00000556718 BCS1LQ9Y276 419 aa8.62□□□□□ -1.03
PRPF39-210ENST00000556718 NFKB1P19838 968 aa8.61□□□□□ -1.03
PRPF39-210ENST00000556718 TXNRD3Q86VQ6 643 aa8.61□□□□□ -1.03
PRPF39-210ENST00000556718 TIMELESSQ9UNS1 1208 aa8.61□□□□□ -1.03
PRPF39-210ENST00000556718 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
PRPF39-210ENST00000556718 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
PRPF39-210ENST00000556718 RAC1P63000 192 aa8.6□□□□□ -1.03
PRPF39-210ENST00000556718 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
PRPF39-210ENST00000556718 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
PRPF39-210ENST00000556718 RASA1P20936 1047 aa8.59□□□□□ -1.03
PRPF39-210ENST00000556718 FMR1NBQ8N0W7 255 aaPredicted RBP8.59□□□□□ -1.03
PRPF39-210ENST00000556718 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
PRPF39-210ENST00000556718 SEC13P55735 322 aa8.58□□□□□ -1.04
PRPF39-210ENST00000556718 PLAURQ03405 335 aa8.58□□□□□ -1.04
PRPF39-210ENST00000556718 CCINQ13939 588 aa8.58□□□□□ -1.04
PRPF39-210ENST00000556718 TP53INP1Q96A56 240 aa8.58□□□□□ -1.04
PRPF39-210ENST00000556718 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
PRPF39-210ENST00000556718 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
PRPF39-210ENST00000556718 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
PRPF39-210ENST00000556718 TGFBR3LH3BV60 316 aa8.57□□□□□ -1.04
PRPF39-210ENST00000556718 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
PRPF39-210ENST00000556718 NRG1Q02297 640 aaPredicted RBP8.57□□□□□ -1.04
PRPF39-210ENST00000556718 HIF1AQ16665 826 aa8.57□□□□□ -1.04
PRPF39-210ENST00000556718 RTN1Q16799 776 aa8.57□□□□□ -1.04
PRPF39-210ENST00000556718 IER5Q5VY09 327 aa8.57□□□□□ -1.04
PRPF39-210ENST00000556718 USP21Q9UK80 565 aa8.57□□□□□ -1.04
PRPF39-210ENST00000556718 CPB1P15086 417 aa8.56□□□□□ -1.04
PRPF39-210ENST00000556718 FLIIQ13045 1269 aa8.56□□□□□ -1.04
PRPF39-210ENST00000556718 GRIK5Q16478 980 aa8.56□□□□□ -1.04
PRPF39-210ENST00000556718 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
PRPF39-210ENST00000556718 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
PRPF39-210ENST00000556718 MAFBQ9Y5Q3 323 aaPredicted RBP8.56□□□□□ -1.04
PRPF39-210ENST00000556718 ZBTB42B2RXF5 422 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 FAM35AQ86V20 835 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 LPIN3Q9BQK8 851 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
PRPF39-210ENST00000556718 INPP5BP32019 993 aa8.54□□□□□ -1.04
PRPF39-210ENST00000556718 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
PRPF39-210ENST00000556718 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
PRPF39-210ENST00000556718 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
PRPF39-210ENST00000556718 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
PRPF39-210ENST00000556718 GLMNQ92990 594 aa8.54□□□□□ -1.04
PRPF39-210ENST00000556718 HYAL3O43820 417 aaPredicted RBP8.53□□□□□ -1.04
PRPF39-210ENST00000556718 IDH3AP50213 366 aa8.53□□□□□ -1.04
PRPF39-210ENST00000556718 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
PRPF39-210ENST00000556718 DPYDQ12882 1025 aa8.53□□□□□ -1.04
PRPF39-210ENST00000556718 LRP8Q14114 963 aa8.53□□□□□ -1.04
PRPF39-210ENST00000556718 PERM1Q5SV97 790 aa8.53□□□□□ -1.04
PRPF39-210ENST00000556718 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
PRPF39-210ENST00000556718 PTK7Q13308 1070 aa8.52□□□□□ -1.05
PRPF39-210ENST00000556718 CLUAP1Q96AJ1 413 aa8.52□□□□□ -1.05
PRPF39-210ENST00000556718 IFT43Q96FT9 208 aa8.52□□□□□ -1.05
PRPF39-210ENST00000556718 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
PRPF39-210ENST00000556718 IGFBP4P22692 258 aa8.51□□□□□ -1.05
PRPF39-210ENST00000556718 NOS3P29474 1203 aa8.51□□□□□ -1.05
PRPF39-210ENST00000556718 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms