RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
SNX6-208ENST00000556712 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 PDZRN3Q9UPQ7 1066 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
SNX6-208ENST00000556712 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 NPR1P16066 1061 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 PRELPP51888 382 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 PPP1R42Q7Z4L9 355 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 CNKSR1Q969H4 720 aa13.38□□□□□ -0.27
SNX6-208ENST00000556712 UTP14AQ9BVJ6 771 aaKnown RBP13.38□□□□□ -0.27
SNX6-208ENST00000556712 NFKBIEO00221 500 aa13.37□□□□□ -0.27
SNX6-208ENST00000556712 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
SNX6-208ENST00000556712 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
SNX6-208ENST00000556712 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
SNX6-208ENST00000556712 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
SNX6-208ENST00000556712 RNF181Q9P0P0 153 aa13.37□□□□□ -0.27
SNX6-208ENST00000556712 TAF1P21675 1872 aa13.37□□□□□ -0.27
SNX6-208ENST00000556712 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
SNX6-208ENST00000556712 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
SNX6-208ENST00000556712 G2E3Q7L622 706 aa13.36□□□□□ -0.27
SNX6-208ENST00000556712 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
SNX6-208ENST00000556712 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
SNX6-208ENST00000556712 TRMT112Q9UI30 125 aaKnown RBP13.36□□□□□ -0.27
SNX6-208ENST00000556712 COL4A1P02462 1669 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
SNX6-208ENST00000556712 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
SNX6-208ENST00000556712 MIER1Q8N108 512 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
SNX6-208ENST00000556712 MYD88Q99836 296 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 STK31Q9BXU1 1019 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
SNX6-208ENST00000556712 VAMP4O75379 141 aa13.34□□□□□ -0.27
SNX6-208ENST00000556712 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
SNX6-208ENST00000556712 SH3TC1Q8TE82 1336 aa13.34□□□□□ -0.27
SNX6-208ENST00000556712 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
SNX6-208ENST00000556712 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
SNX6-208ENST00000556712 MAP3K2Q9Y2U5 619 aa13.33□□□□□ -0.28
SNX6-208ENST00000556712 SNED1Q8TER0 1413 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
SNX6-208ENST00000556712 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 LMNB1P20700 586 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 TAOK3Q9H2K8 898 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
SNX6-208ENST00000556712 ABCC4O15439 1325 aa13.32□□□□□ -0.28
SNX6-208ENST00000556712 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 HOXA10P31260 410 aaPredicted RBP13.31□□□□□ -0.28
SNX6-208ENST00000556712 FLIIQ13045 1269 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 JARID2Q92833 1246 aaPredicted RBP13.31□□□□□ -0.28
SNX6-208ENST00000556712 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
SNX6-208ENST00000556712 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
SNX6-208ENST00000556712 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 MYH3P11055 1940 aa13.31□□□□□ -0.28
SNX6-208ENST00000556712 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
SNX6-208ENST00000556712 SOGA3Q5TF21 947 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 LTBP3Q9NS15 1303 aa13.3□□□□□ -0.28
SNX6-208ENST00000556712 COL4A5P29400 1685 aa13.29□□□□□ -0.28
SNX6-208ENST00000556712 E9PSI1 815 aa13.29□□□□□ -0.28
SNX6-208ENST00000556712 IGKV5-2P06315 115 aa13.29□□□□□ -0.28
SNX6-208ENST00000556712 TRIM28Q13263 835 aaKnown RBP13.29□□□□□ -0.28
SNX6-208ENST00000556712 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
SNX6-208ENST00000556712 CWF19L2Q2TBE0 894 aaKnown RBP13.29□□□□□ -0.28
SNX6-208ENST00000556712 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
SNX6-208ENST00000556712 NMRK2Q9NPI5 230 aa13.29□□□□□ -0.28
SNX6-208ENST00000556712 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
SNX6-208ENST00000556712 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
SNX6-208ENST00000556712 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX6-208ENST00000556712 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
SNX6-208ENST00000556712 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
SNX6-208ENST00000556712 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
SNX6-208ENST00000556712 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
SNX6-208ENST00000556712 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
SNX6-208ENST00000556712 F6X3S4 739 aa13.27□□□□□ -0.29
SNX6-208ENST00000556712 KIF3CO14782 793 aa13.27□□□□□ -0.29
SNX6-208ENST00000556712 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
SNX6-208ENST00000556712 PCCAP05165 728 aaPredicted RBP13.26□□□□□ -0.29
SNX6-208ENST00000556712 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
SNX6-208ENST00000556712 GRAPQ13588 217 aa13.26□□□□□ -0.29
SNX6-208ENST00000556712 LTBP1Q14766 1721 aa13.26□□□□□ -0.29
SNX6-208ENST00000556712 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
SNX6-208ENST00000556712 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
SNX6-208ENST00000556712 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms