RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 TTC21AQ8NDW8 1320 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 GOLIM4O00461 696 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 KRT222Q8N1A0 295 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 MYO5CQ9NQX4 1742 aa17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
ARHGEF40-207ENST00000556399 MYOM2P54296 1465 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 SGSM2O43147 1006 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 UGGT1Q9NYU2 1555 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 EYA1Q99502 592 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 POLR3GO15318 223 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 Q6ZUG5 572 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 FLT4P35916 1363 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 A0A087WZG4 1122 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 GTPBP4Q9BZE4 634 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-207ENST00000556399 CDC42BPAQ5VT25 1732 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 CASQ1P31415 396 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 V9GYY5 206 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 RAD50Q92878 1312 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 ISM2Q6H9L7 571 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 AOX1Q06278 1338 aa17.48■□□□□ 0.39
ARHGEF40-207ENST00000556399 HSPA4P34932 840 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 DTNBO60941 627 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 TXLNAP40222 546 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 PHF8Q9UPP1 1060 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 RIOK3O14730 519 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 SKIDA1Q1XH10 827 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 MAGEC2Q9UBF1 373 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 GRM8O00222 908 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 JARID2Q92833 1246 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
ARHGEF40-207ENST00000556399 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 IGSF3O75054 1194 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 AXDND1Q5T1B0 1012 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 WASF1Q92558 559 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 ORC3Q9UBD5 711 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 ERBB4Q15303 1308 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
ARHGEF40-207ENST00000556399 MAP3K19Q56UN5 1328 aa17.46■□□□□ 0.38
ARHGEF40-207ENST00000556399 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 CNNM3Q8NE01 707 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 MRPS27Q92552 414 aaKnown RBP17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 ZNF213O14771 459 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 TSC1Q92574 1164 aa17.45■□□□□ 0.38
ARHGEF40-207ENST00000556399 IQGAP3Q86VI3 1631 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 HAND2P61296 217 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 RAB11FIP4Q86YS3 637 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 ZNHIT6Q9NWK9 470 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 MTMR7Q9Y216 660 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 PTCD1O75127 700 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 PROSER2Q86WR7 435 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 SLU7O95391 586 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 GTF2F1P35269 517 aaKnown RBP eCLIP17.44■□□□□ 0.384e-7■■■■□ 25.8
ARHGEF40-207ENST00000556399 CWF19L2Q2TBE0 894 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-207ENST00000556399 TDO2P48775 406 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 PDE4CQ08493 712 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 FEZ1Q99689 392 aa17.43■□□□□ 0.38
ARHGEF40-207ENST00000556399 KIF5CO60282 957 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
ARHGEF40-207ENST00000556399 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms