RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 STRCQ7RTU9 1775 aa10.51□□□□□ -0.73
ATXN3-235ENST00000556082 PTPRCP08575 1304 aa10.51□□□□□ -0.73
ATXN3-235ENST00000556082 CEMIPQ8WUJ3 1361 aa10.51□□□□□ -0.73
ATXN3-235ENST00000556082 ALS2Q96Q42 1657 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 PXDNQ92626 1479 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-235ENST00000556082 SLC19A1P41440 591 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 ITPRIPQ8IWB1 547 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 ANKRD24Q8TF21 1146 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 CHMP4AQ9BY43 222 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 SLAIN2Q9P270 581 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 CPDO75976 1380 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
ATXN3-235ENST00000556082 LTN1O94822 1766 aa10.49□□□□□ -0.73
ATXN3-235ENST00000556082 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-235ENST00000556082 AKAP4Q5JQC9 854 aa10.49□□□□□ -0.73
ATXN3-235ENST00000556082 INTS3Q68E01 1043 aaKnown RBP10.49□□□□□ -0.73
ATXN3-235ENST00000556082 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
ATXN3-235ENST00000556082 BRINP3Q76B58 766 aa10.49□□□□□ -0.73
ATXN3-235ENST00000556082 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-235ENST00000556082 OVOS2A0A0G2JMS6 1433 aa10.49□□□□□ -0.73
ATXN3-235ENST00000556082 MED1Q15648 1581 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-235ENST00000556082 LRRC37A3O60309 1634 aa10.48□□□□□ -0.73
ATXN3-235ENST00000556082 RDH13Q8NBN7 331 aa10.48□□□□□ -0.73
ATXN3-235ENST00000556082 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
ATXN3-235ENST00000556082 TLL1O43897 1013 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 S1PR4O95977 384 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 HOXB7P09629 217 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 GCGRP47871 477 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
ATXN3-235ENST00000556082 SMC5Q8IY18 1101 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 USHBP1Q8N6Y0 703 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
ATXN3-235ENST00000556082 GRIPAP1Q4V328 841 aa10.46□□□□□ -0.73
ATXN3-235ENST00000556082 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
ATXN3-235ENST00000556082 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
ATXN3-235ENST00000556082 SPSB2Q99619 263 aa10.46□□□□□ -0.73
ATXN3-235ENST00000556082 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.73
ATXN3-235ENST00000556082 ZNF335Q9H4Z2 1342 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-235ENST00000556082 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
ATXN3-235ENST00000556082 LMO7Q8WWI1 1683 aa10.45□□□□□ -0.74
ATXN3-235ENST00000556082 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
ATXN3-235ENST00000556082 ZC3H6P61129 1189 aaKnown RBP10.45□□□□□ -0.74
ATXN3-235ENST00000556082 KRT24Q2M2I5 525 aa10.45□□□□□ -0.74
ATXN3-235ENST00000556082 CCDC30Q5VVM6 783 aa10.45□□□□□ -0.74
ATXN3-235ENST00000556082 ZNF530Q6P9A1 599 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-235ENST00000556082 RGS12O14924 1447 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
ATXN3-235ENST00000556082 PRR20EP86478 221 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 PRR20CP86479 221 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 PRR20DP86480 221 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 PRR20BP86481 221 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 PRR20AP86496 221 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 MORN1Q5T089 497 aa10.44□□□□□ -0.74
ATXN3-235ENST00000556082 DDX17Q92841 729 aaKnown RBP10.44□□□□□ -0.74
ATXN3-235ENST00000556082 CCT4P50991 539 aaKnown RBP10.43□□□□□ -0.74
ATXN3-235ENST00000556082 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
ATXN3-235ENST00000556082 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
ATXN3-235ENST00000556082 GCC1Q96CN9 775 aa10.43□□□□□ -0.74
ATXN3-235ENST00000556082 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
ATXN3-235ENST00000556082 LGR6Q9HBX8 967 aa10.43□□□□□ -0.74
ATXN3-235ENST00000556082 COL18A1P39060 1754 aa10.43□□□□□ -0.74
ATXN3-235ENST00000556082 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-235ENST00000556082 NUCB1Q02818 461 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 TEFQ10587 303 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
ATXN3-235ENST00000556082 C8orf34Q49A92 452 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 SKAP1Q86WV1 359 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
ATXN3-235ENST00000556082 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
ATXN3-235ENST00000556082 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-235ENST00000556082 ANP32AP39687 249 aaKnown RBP10.41□□□□□ -0.74
ATXN3-235ENST00000556082 RGS3P49796 1198 aa10.41□□□□□ -0.74
ATXN3-235ENST00000556082 FUT2Q10981 343 aa10.41□□□□□ -0.74
ATXN3-235ENST00000556082 RPAP2Q8IXW5 612 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-235ENST00000556082 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
ATXN3-235ENST00000556082 EMID1Q96A84 441 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-235ENST00000556082 NLRP2Q9NX02 1062 aa10.41□□□□□ -0.74
ATXN3-235ENST00000556082 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 IRF6O14896 467 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 MPRIPQ6WCQ1 1025 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 CRYBG1Q9Y4K1 1723 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 ADAMTS7Q9UKP4 1686 aa10.4□□□□□ -0.74
ATXN3-235ENST00000556082 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-235ENST00000556082 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
ATXN3-235ENST00000556082 PHKG2P15735 406 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 FLIIQ13045 1269 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 G2E3Q7L622 706 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 SIRT2Q8IXJ6 389 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
ATXN3-235ENST00000556082 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms