RNA–Protein interactions for RNA: ENST00000555960.5

ATL1-207, Transcript of atlastin GTPase 1, humanhuman

TSL 5

Gene ATL1, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-207ENST00000555960 CRY2Q49AN0 593 aa16.78■□□□□ 0.28
ATL1-207ENST00000555960 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
ATL1-207ENST00000555960 C9orf131Q5VYM1 1079 aa16.78■□□□□ 0.28
ATL1-207ENST00000555960 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
ATL1-207ENST00000555960 ATP5J2-PTCD1G3V325 749 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 VAMP4O75379 141 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 PRELPP51888 382 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
ATL1-207ENST00000555960 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
ATL1-207ENST00000555960 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
ATL1-207ENST00000555960 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
ATL1-207ENST00000555960 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
ATL1-207ENST00000555960 NFKBIEO00221 500 aa16.76■□□□□ 0.27
ATL1-207ENST00000555960 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
ATL1-207ENST00000555960 C7orf43Q8WVR3 580 aa16.76■□□□□ 0.27
ATL1-207ENST00000555960 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
ATL1-207ENST00000555960 SLX4Q8IY92 1834 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 ANKRD36CQ5JPF3 1778 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
ATL1-207ENST00000555960 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 RNF181Q9P0P0 153 aa16.75■□□□□ 0.27
ATL1-207ENST00000555960 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
ATL1-207ENST00000555960 HCLS1P14317 486 aaPredicted RBP16.74■□□□□ 0.27
ATL1-207ENST00000555960 LMNB1P20700 586 aa16.74■□□□□ 0.27
ATL1-207ENST00000555960 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
ATL1-207ENST00000555960 G2E3Q7L622 706 aa16.74■□□□□ 0.27
ATL1-207ENST00000555960 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
ATL1-207ENST00000555960 RPGRQ92834 1020 aaKnown RBP16.74■□□□□ 0.27
ATL1-207ENST00000555960 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
ATL1-207ENST00000555960 DDX58O95786 925 aaKnown RBP16.73■□□□□ 0.27
ATL1-207ENST00000555960 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
ATL1-207ENST00000555960 MIER1Q8N108 512 aa16.73■□□□□ 0.27
ATL1-207ENST00000555960 MYD88Q99836 296 aa16.73■□□□□ 0.27
ATL1-207ENST00000555960 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
ATL1-207ENST00000555960 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
ATL1-207ENST00000555960 PI4KAP2A4QPH2 592 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 KSR2Q6VAB6 950 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 PI4KAP1Q8N8J0 262 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
ATL1-207ENST00000555960 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 MAP3K2Q9Y2U5 619 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
ATL1-207ENST00000555960 CCDC93Q567U6 631 aa16.71■□□□□ 0.27
ATL1-207ENST00000555960 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
ATL1-207ENST00000555960 SBF1O95248 1867 aa16.71■□□□□ 0.27
ATL1-207ENST00000555960 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
ATL1-207ENST00000555960 CACNA1SQ13698 1873 aa16.7■□□□□ 0.26
ATL1-207ENST00000555960 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
ATL1-207ENST00000555960 FER1L6Q2WGJ9 1857 aa16.69■□□□□ 0.26
ATL1-207ENST00000555960 FLIIQ13045 1269 aa16.69■□□□□ 0.26
ATL1-207ENST00000555960 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
ATL1-207ENST00000555960 E9PSI1 815 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
ATL1-207ENST00000555960 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
ATL1-207ENST00000555960 ABCC4O15439 1325 aa16.68■□□□□ 0.26
ATL1-207ENST00000555960 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
ATL1-207ENST00000555960 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
ATL1-207ENST00000555960 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATL1-207ENST00000555960 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
ATL1-207ENST00000555960 CDCA7LQ96GN5 454 aa16.67■□□□□ 0.26
ATL1-207ENST00000555960 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
ATL1-207ENST00000555960 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
ATL1-207ENST00000555960 FKBP5Q13451 457 aaPredicted RBP16.66■□□□□ 0.26
ATL1-207ENST00000555960 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
ATL1-207ENST00000555960 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
ATL1-207ENST00000555960 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
ATL1-207ENST00000555960 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
ATL1-207ENST00000555960 SNED1Q8TER0 1413 aa16.66■□□□□ 0.26
ATL1-207ENST00000555960 KIF3CO14782 793 aa16.65■□□□□ 0.26
ATL1-207ENST00000555960 BBOX1O75936 387 aa16.65■□□□□ 0.26
ATL1-207ENST00000555960 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
ATL1-207ENST00000555960 NMRK2Q9NPI5 230 aa16.65■□□□□ 0.26
ATL1-207ENST00000555960 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
ATL1-207ENST00000555960 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
ATL1-207ENST00000555960 LAMB2P55268 1798 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 GRAPQ13588 217 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
ATL1-207ENST00000555960 GRAPLQ8TC17 118 aaPredicted RBP16.64■□□□□ 0.25
ATL1-207ENST00000555960 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 ATP6V0A2Q9Y487 856 aa16.64■□□□□ 0.25
ATL1-207ENST00000555960 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
ATL1-207ENST00000555960 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
ATL1-207ENST00000555960 SP8Q8IXZ3 490 aa16.63■□□□□ 0.25
ATL1-207ENST00000555960 PSMD1Q99460 953 aa16.63■□□□□ 0.25
ATL1-207ENST00000555960 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
ATL1-207ENST00000555960 F6X3S4 739 aa16.62■□□□□ 0.25
ATL1-207ENST00000555960 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms