RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 FNDC3AQ9Y2H6 1198 aaKnown RBP4.62□□□□□ -1.67
MTHFD1-212ENST00000555858 TNFRSF21O75509 655 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 CTSHP09668 335 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 GNL2Q13823 731 aaKnown RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 PDE12Q6L8Q7 609 aaKnown RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 SPNS2Q8IVW8 549 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 SNX29Q8TEQ0 813 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 HSH2DQ96JZ2 352 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 INSM2Q96T92 566 aaPredicted RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 TANGO6Q9C0B7 1094 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 CAPN10Q9HC96 672 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 POLMQ9NP87 494 aaPredicted RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 NLRP2Q9NX02 1062 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 TOR4AQ9NXH8 423 aa4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 V9GY48 417 aaPredicted RBP4.61□□□□□ -1.67
MTHFD1-212ENST00000555858 GDF9O60383 454 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 UPP2O95045 317 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 SMPD1P17405 629 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 INPP5BP32019 993 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 PHKA2P46019 1235 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 WDR44Q5JSH3 913 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 BICDL1Q6ZP65 573 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 ZNF438Q7Z4V0 828 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 BTLAQ7Z6A9 289 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 LINC00528Q8N1L1 170 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 ZNF280CQ8ND82 737 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 CCDC74AQ96AQ1 378 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 ACBD3Q9H3P7 528 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 C12orf49Q9H741 205 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 NEUROD4Q9HD90 331 aa4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 FOXD3Q9UJU5 478 aaPredicted RBP4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 RTCBQ9Y3I0 505 aaKnown RBP4.6□□□□□ -1.67
MTHFD1-212ENST00000555858 UBAP1LF5GYI3 381 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 PHACTR2O75167 634 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 HMGB1P09429 215 aaKnown RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 EPB42P16452 691 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 ATP4AP20648 1035 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 CTSOP43234 321 aaPredicted RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 PTPN12Q05209 780 aaKnown RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 TRIP4Q15650 581 aaPredicted RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 USPL1Q5W0Q7 1092 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 ZNF654Q8IZM8 581 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 FAM177A1Q8N128 213 aaPredicted RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 CMTR1Q8N1G2 835 aaKnown RBP4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 KLRG1Q96E93 195 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 SRCIN1Q9C0H9 1055 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 ELP3Q9H9T3 547 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 FAM8A1Q9UBU6 413 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 PRKAG2Q9UGJ0 569 aa4.59□□□□□ -1.67
MTHFD1-212ENST00000555858 USP31Q70CQ4 1352 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 A0A0G2JS52 829 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 A0A1B0GTH6 734 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 TNFRSF10AO00220 468 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 CANXP27824 592 aaKnown RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 IRS1P35568 1242 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 POU4F2Q12837 409 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 TAF1CQ15572 869 aaPredicted RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 ARSJQ5FYB0 599 aaPredicted RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 PI16Q6UXB8 463 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 HS2ST1Q7LGA3 356 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 RNF217Q8TC41 542 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 EPS8L3Q8TE67 593 aaKnown RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 HPS1Q92902 700 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 ARMC5Q96C12 935 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 PUS7Q96PZ0 661 aaKnown RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 ZIC5Q96T25 663 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 GMLQ99445 158 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 OSBPL7Q9BZF2 842 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 DDX41Q9UJV9 622 aaKnown RBP4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 USP20Q9Y2K6 914 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 KCNMB2Q9Y691 235 aa4.58□□□□□ -1.68
MTHFD1-212ENST00000555858 CAPN5O15484 640 aaPredicted RBP4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 ATP2B1P20020 1258 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 TNNI2P48788 182 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 ST13P50502 369 aaKnown RBP4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRR20EP86478 221 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRR20CP86479 221 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRR20DP86480 221 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRR20BP86481 221 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRR20AP86496 221 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 ZNF394Q53GI3 561 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 LRRC69Q6ZNQ3 347 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 LYSMD3Q7Z3D4 306 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 PRICKLE2Q7Z3G6 844 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 USP48Q86UV5 1035 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 NPHS2Q9NP85 383 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 TIMMDC1Q9NPL8 285 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 C11orf16Q9NQ32 467 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 TMEM63CQ9P1W3 806 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 GGT7Q9UJ14 662 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 INPP5FQ9Y2H2 1132 aa4.57□□□□□ -1.68
MTHFD1-212ENST00000555858 A0A1W2PNR3 127 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 XYLBO75191 536 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 EGFRP00533 1210 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 BMP2P12643 396 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 HSP90B1P14625 803 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms