RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 TRMT112Q9UI30 125 aaKnown RBP29.27■■■□□ 2.28
CDKN3-208ENST00000555837 ANKRD36CQ5JPF3 1778 aa29.26■■■□□ 2.28
CDKN3-208ENST00000555837 NTSR2O95665 410 aa29.26■■■□□ 2.27
CDKN3-208ENST00000555837 KSR2Q6VAB6 950 aa29.26■■■□□ 2.27
CDKN3-208ENST00000555837 CCDC24Q8N4L8 307 aa29.26■■■□□ 2.27
CDKN3-208ENST00000555837 DLEC1Q9Y238 1755 aa29.26■■■□□ 2.27
CDKN3-208ENST00000555837 SH3TC1Q8TE82 1336 aa29.25■■■□□ 2.27
CDKN3-208ENST00000555837 ERFEQ4G0M1 354 aa29.25■■■□□ 2.27
CDKN3-208ENST00000555837 RPGRQ92834 1020 aaKnown RBP29.25■■■□□ 2.27
CDKN3-208ENST00000555837 SPINK5Q9NQ38 1064 aaPredicted RBP29.25■■■□□ 2.27
CDKN3-208ENST00000555837 ARFGEF1Q9Y6D6 1849 aa29.24■■■□□ 2.27
CDKN3-208ENST00000555837 SLFN5Q08AF3 891 aa29.24■■■□□ 2.27
CDKN3-208ENST00000555837 SLC10A5Q5PT55 438 aa29.24■■■□□ 2.27
CDKN3-208ENST00000555837 NUTM1Q86Y26 1132 aa29.24■■■□□ 2.27
CDKN3-208ENST00000555837 ISCA1Q9BUE6 129 aa29.24■■■□□ 2.27
CDKN3-208ENST00000555837 ANKRD31Q8N7Z5 1873 aa29.23■■■□□ 2.27
CDKN3-208ENST00000555837 CT47B1P0C2W7 299 aaPredicted RBP29.23■■■□□ 2.27
CDKN3-208ENST00000555837 CCDC191Q8NCU4 936 aa29.23■■■□□ 2.27
CDKN3-208ENST00000555837 METTL22Q9BUU2 404 aaPredicted RBP29.23■■■□□ 2.27
CDKN3-208ENST00000555837 FLIIQ13045 1269 aa29.21■■■□□ 2.27
CDKN3-208ENST00000555837 FKBP5Q13451 457 aaPredicted RBP29.21■■■□□ 2.27
CDKN3-208ENST00000555837 CRY2Q49AN0 593 aa29.21■■■□□ 2.27
CDKN3-208ENST00000555837 TMX4Q9H1E5 349 aaPredicted RBP29.21■■■□□ 2.27
CDKN3-208ENST00000555837 RBM17Q96I25 401 aaKnown RBP29.2■■■□□ 2.26
CDKN3-208ENST00000555837 MAP3K2Q9Y2U5 619 aa29.2■■■□□ 2.26
CDKN3-208ENST00000555837 PI4KAP2A4QPH2 592 aa29.19■■■□□ 2.26
CDKN3-208ENST00000555837 GRIPAP1Q4V328 841 aa29.19■■■□□ 2.26
CDKN3-208ENST00000555837 PI4KAP1Q8N8J0 262 aa29.19■■■□□ 2.26
CDKN3-208ENST00000555837 MYD88Q99836 296 aa29.19■■■□□ 2.26
CDKN3-208ENST00000555837 ATP5J2-PTCD1G3V325 749 aa29.18■■■□□ 2.26
CDKN3-208ENST00000555837 TCERG1O14776 1098 aaKnown RBP29.18■■■□□ 2.26
CDKN3-208ENST00000555837 CWC25Q9NXE8 425 aaPredicted RBP29.18■■■□□ 2.26
CDKN3-208ENST00000555837 ARFGEF2Q9Y6D5 1785 aa29.18■■■□□ 2.26
CDKN3-208ENST00000555837 HOXA10P31260 410 aaPredicted RBP29.17■■■□□ 2.26
CDKN3-208ENST00000555837 CC2D2BQ6DHV5 1058 aa29.17■■■□□ 2.26
CDKN3-208ENST00000555837 PRPF40BQ6NWY9 871 aaKnown RBP29.17■■■□□ 2.26
CDKN3-208ENST00000555837 ABCC12Q96J65 1359 aa29.16■■■□□ 2.26
CDKN3-208ENST00000555837 HNRNPUQ00839 825 aaKnown RBP eCLIP29.16■■■□□ 2.26
CDKN3-208ENST00000555837 ZBTB38Q8NAP3 1195 aaPredicted RBP29.16■■■□□ 2.26
CDKN3-208ENST00000555837 CRAMP1Q96RY5 1269 aa29.16■■■□□ 2.26
CDKN3-208ENST00000555837 TRMT2AQ8IZ69 625 aaKnown RBP29.14■■■□□ 2.26
CDKN3-208ENST00000555837 GOLGB1Q14789 3259 aaKnown RBP29.14■■■□□ 2.25
CDKN3-208ENST00000555837 ALDH1L2Q3SY69 923 aa29.13■■■□□ 2.25
CDKN3-208ENST00000555837 DNAAF4Q8WXU2 420 aa29.13■■■□□ 2.25
CDKN3-208ENST00000555837 COL11A2P13942 1736 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-208ENST00000555837 C21orf2O43822 256 aa29.12■■■□□ 2.25
CDKN3-208ENST00000555837 PCCAP05165 728 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-208ENST00000555837 CCDC93Q567U6 631 aa29.12■■■□□ 2.25
CDKN3-208ENST00000555837 DDX46Q7L014 1031 aaKnown RBP29.12■■■□□ 2.25
CDKN3-208ENST00000555837 RTKN2Q8IZC4 609 aa29.12■■■□□ 2.25
CDKN3-208ENST00000555837 FAM89AQ96GI7 184 aa29.11■■■□□ 2.25
CDKN3-208ENST00000555837 IRS4O14654 1257 aaPredicted RBP29.1■■■□□ 2.25
CDKN3-208ENST00000555837 LMNB1P20700 586 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 G2E3Q7L622 706 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 TMC4Q7Z404 712 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 LINS1Q8NG48 757 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 CDCA7LQ96GN5 454 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 ADCY9O60503 1353 aa29.1■■■□□ 2.25
CDKN3-208ENST00000555837 BBOX1O75936 387 aa29.09■■■□□ 2.25
CDKN3-208ENST00000555837 HCLS1P14317 486 aaPredicted RBP29.09■■■□□ 2.25
CDKN3-208ENST00000555837 PTPRCP08575 1304 aa29.09■■■□□ 2.25
CDKN3-208ENST00000555837 ZC3H4Q9UPT8 1303 aaKnown RBP29.09■■■□□ 2.25
CDKN3-208ENST00000555837 TAOK3Q9H2K8 898 aa29.08■■■□□ 2.25
CDKN3-208ENST00000555837 LTBP3Q9NS15 1303 aa29.08■■■□□ 2.25
CDKN3-208ENST00000555837 SF3B3Q15393 1217 aaKnown RBP29.07■■■□□ 2.24
CDKN3-208ENST00000555837 UTRNP46939 3433 aa29.06■■■□□ 2.24
CDKN3-208ENST00000555837 CDHR2Q9BYE9 1310 aa29.06■■■□□ 2.24
CDKN3-208ENST00000555837 NEURL1BA8MQ27 555 aa29.06■■■□□ 2.24
CDKN3-208ENST00000555837 ZNF219Q9P2Y4 722 aaPredicted RBP29.06■■■□□ 2.24
CDKN3-208ENST00000555837 PDE8AO60658 829 aa29.05■■■□□ 2.24
CDKN3-208ENST00000555837 C9orf131Q5VYM1 1079 aa29.05■■■□□ 2.24
CDKN3-208ENST00000555837 TNRC6CQ9HCJ0 1690 aaKnown RBP29.05■■■□□ 2.24
CDKN3-208ENST00000555837 PPEF1O14829 653 aaPredicted RBP29.04■■■□□ 2.24
CDKN3-208ENST00000555837 CCDC152Q4G0S7 254 aa29.04■■■□□ 2.24
CDKN3-208ENST00000555837 C7orf43Q8WVR3 580 aa29.04■■■□□ 2.24
CDKN3-208ENST00000555837 RNF181Q9P0P0 153 aa29.04■■■□□ 2.24
CDKN3-208ENST00000555837 ZBED9Q6R2W3 1325 aa29.03■■■□□ 2.24
CDKN3-208ENST00000555837 IGKV5-2P06315 115 aa29.03■■■□□ 2.24
CDKN3-208ENST00000555837 ZNF784Q8NCA9 323 aaPredicted RBP29.03■■■□□ 2.24
CDKN3-208ENST00000555837 SMC4Q9NTJ3 1288 aa29.03■■■□□ 2.24
CDKN3-208ENST00000555837 SLX4Q8IY92 1834 aa29.03■■■□□ 2.24
CDKN3-208ENST00000555837 GRAPQ13588 217 aa29.02■■■□□ 2.24
CDKN3-208ENST00000555837 GCKRQ14397 625 aa29.02■■■□□ 2.24
CDKN3-208ENST00000555837 RTL5Q5HYW3 569 aaPredicted RBP29.02■■■□□ 2.24
CDKN3-208ENST00000555837 GRAPLQ8TC17 118 aaPredicted RBP29.02■■■□□ 2.24
CDKN3-208ENST00000555837 FKBP4Q02790 459 aaKnown RBP eCLIP29.01■■■□□ 2.23
CDKN3-208ENST00000555837 SYNE4Q8N205 404 aa29.01■■■□□ 2.23
CDKN3-208ENST00000555837 MRPL50Q8N5N7 158 aaKnown RBP29.01■■■□□ 2.23
CDKN3-208ENST00000555837 ALDH1L1O75891 902 aa29■■■□□ 2.23
CDKN3-208ENST00000555837 CWF19L2Q2TBE0 894 aaKnown RBP29■■■□□ 2.23
CDKN3-208ENST00000555837 SSH1Q8WYL5 1049 aa29■■■□□ 2.23
CDKN3-208ENST00000555837 ATP6V0A2Q9Y487 856 aa29■■■□□ 2.23
CDKN3-208ENST00000555837 CACNA1SQ13698 1873 aa29■■■□□ 2.23
CDKN3-208ENST00000555837 ABCC4O15439 1325 aa28.99■■■□□ 2.23
CDKN3-208ENST00000555837 NFKBIEO00221 500 aa28.99■■■□□ 2.23
CDKN3-208ENST00000555837 SUPT20HQ8NEM7 779 aa28.99■■■□□ 2.23
CDKN3-208ENST00000555837 PSMD1Q99460 953 aa28.99■■■□□ 2.23
CDKN3-208ENST00000555837 H7C1W4 665 aa28.98■■■□□ 2.23
CDKN3-208ENST00000555837 C3orf67Q6ZVT6 689 aa28.98■■■□□ 2.23
CDKN3-208ENST00000555837 SP8Q8IXZ3 490 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms