RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 SMAP1Q8IYB5 467 aaPredicted RBP21.07■□□□□ 0.96
RCCD1-204ENST00000555737 MRVI1Q9Y6F6 885 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 SSH2Q76I76 1423 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 H3BQV1 296 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 MYL6BP14649 208 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 TMEM87AQ8NBN3 555 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 FAM200AQ8TCP9 573 aa21.07■□□□□ 0.96
RCCD1-204ENST00000555737 FTOQ9C0B1 505 aaKnown RBP eCLIP21.07■□□□□ 0.96
RCCD1-204ENST00000555737 G3BP1Q13283 466 aaKnown RBP eCLIP21.07■□□□□ 0.96
RCCD1-204ENST00000555737 IGSF1Q8N6C5 1336 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 FUCA2Q9BTY2 467 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 CCDC171Q6TFL3 1326 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 PLEKHG3A1L390 1219 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 POLA2Q14181 598 aa21.06■□□□□ 0.96
RCCD1-204ENST00000555737 DNAJC2Q99543 621 aaKnown RBP21.06■□□□□ 0.96
RCCD1-204ENST00000555737 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
RCCD1-204ENST00000555737 TNNT1P13805 278 aa21.05■□□□□ 0.96
RCCD1-204ENST00000555737 ZNF165P49910 485 aa21.05■□□□□ 0.96
RCCD1-204ENST00000555737 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
RCCD1-204ENST00000555737 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
RCCD1-204ENST00000555737 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
RCCD1-204ENST00000555737 ARHGEF10O15013 1369 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 SLC27A2O14975 620 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 ZNF589Q86UQ0 364 aaPredicted RBP21.04■□□□□ 0.96
RCCD1-204ENST00000555737 ZSWIM6Q9HCJ5 1215 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 ZSCAN20P17040 1043 aaPredicted RBP21.04■□□□□ 0.96
RCCD1-204ENST00000555737 SLFNL1Q499Z3 407 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 CLIP2Q9UDT6 1046 aa21.04■□□□□ 0.96
RCCD1-204ENST00000555737 HSP90AB4PQ58FF6 505 aa21.03■□□□□ 0.96
RCCD1-204ENST00000555737 EIF4A1P60842 406 aaKnown RBP21.03■□□□□ 0.96
RCCD1-204ENST00000555737 NBPF6Q5VWK0 638 aa21.03■□□□□ 0.96
RCCD1-204ENST00000555737 ZSCAN31Q96LW9 406 aaPredicted RBP21.03■□□□□ 0.96
RCCD1-204ENST00000555737 NBPF4Q96M43 638 aa21.03■□□□□ 0.96
RCCD1-204ENST00000555737 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
RCCD1-204ENST00000555737 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
RCCD1-204ENST00000555737 SEC62Q99442 399 aaKnown RBP21.03■□□□□ 0.96
RCCD1-204ENST00000555737 SH2B1Q9NRF2 756 aaPredicted RBP21.03■□□□□ 0.96
RCCD1-204ENST00000555737 FMNL2Q96PY5 1086 aa21.02■□□□□ 0.96
RCCD1-204ENST00000555737 BICC1Q9H694 974 aaKnown RBP21.02■□□□□ 0.96
RCCD1-204ENST00000555737 SPTLC3Q9NUV7 552 aa21.02■□□□□ 0.96
RCCD1-204ENST00000555737 GOLGA6L19H0YKK7 550 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 NECTIN1Q15223 517 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 BRF1Q92994 677 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 CCT2P78371 535 aaKnown RBP21.01■□□□□ 0.95
RCCD1-204ENST00000555737 ZNF771Q7L3S4 317 aaPredicted RBP21.01■□□□□ 0.95
RCCD1-204ENST00000555737 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 SUCLG2Q96I99 432 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 AOX1Q06278 1338 aa21.01■□□□□ 0.95
RCCD1-204ENST00000555737 LEO1Q8WVC0 666 aaPredicted RBP21■□□□□ 0.95
RCCD1-204ENST00000555737 SLC39A6Q13433 755 aa21■□□□□ 0.95
RCCD1-204ENST00000555737 CCDC144BQ3MJ40 725 aa21■□□□□ 0.95
RCCD1-204ENST00000555737 CCDC144CPQ8IYA2 1237 aa21■□□□□ 0.95
RCCD1-204ENST00000555737 CACTINQ8WUQ7 758 aaKnown RBP20.99■□□□□ 0.95
RCCD1-204ENST00000555737 USP16Q9Y5T5 823 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 BECN2A8MW95 431 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 SASH1O94885 1247 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 RIC3Q7Z5B4 369 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 RAB11FIP4Q86YS3 637 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 PPP6R1Q9UPN7 881 aa20.99■□□□□ 0.95
RCCD1-204ENST00000555737 PSMA5P28066 241 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 ZSCAN25Q6NSZ9 544 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 CCDC112Q8NEF3 446 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 PGBD1Q96JS3 809 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
RCCD1-204ENST00000555737 USP27XA6NNY8 438 aa20.97■□□□□ 0.95
RCCD1-204ENST00000555737 DMTNQ08495 405 aa20.97■□□□□ 0.95
RCCD1-204ENST00000555737 RNF20Q5VTR2 975 aa20.97■□□□□ 0.95
RCCD1-204ENST00000555737 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
RCCD1-204ENST00000555737 TTC41PQ6P2S7 1318 aa20.97■□□□□ 0.95
RCCD1-204ENST00000555737 ZNF75DP51815 510 aa20.97■□□□□ 0.95
RCCD1-204ENST00000555737 PDCP20941 246 aa20.96■□□□□ 0.95
RCCD1-204ENST00000555737 ISM2Q6H9L7 571 aa20.96■□□□□ 0.95
RCCD1-204ENST00000555737 Q6ZUG5 572 aa20.96■□□□□ 0.95
RCCD1-204ENST00000555737 ZBTB9Q96C00 473 aa20.96■□□□□ 0.95
RCCD1-204ENST00000555737 TSPOAP1O95153 1857 aa20.96■□□□□ 0.95
RCCD1-204ENST00000555737 NCOA5Q9HCD5 579 aaKnown RBP20.96■□□□□ 0.95
RCCD1-204ENST00000555737 TOB2Q14106 344 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-204ENST00000555737 SCAND2PQ9GZW5 306 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-204ENST00000555737 NCBP1Q09161 790 aaKnown RBP20.95■□□□□ 0.94
RCCD1-204ENST00000555737 C11orf57Q6ZUT1 292 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-204ENST00000555737 DBF4Q9UBU7 674 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-204ENST00000555737 C1orf141Q5JVX7 400 aa20.95■□□□□ 0.94
RCCD1-204ENST00000555737 MAP4K1Q92918 833 aa20.95■□□□□ 0.94
RCCD1-204ENST00000555737 RPS6KB1P23443 525 aa20.94■□□□□ 0.94
RCCD1-204ENST00000555737 ADCY9O60503 1353 aa20.94■□□□□ 0.94
RCCD1-204ENST00000555737 HTATSF1O43719 755 aaKnown RBP20.94■□□□□ 0.94
RCCD1-204ENST00000555737 GTF2F1P35269 517 aaKnown RBP eCLIP20.93■□□□□ 0.94
RCCD1-204ENST00000555737 NEUROD6Q96NK8 337 aa20.93■□□□□ 0.94
RCCD1-204ENST00000555737 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
RCCD1-204ENST00000555737 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
RCCD1-204ENST00000555737 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
RCCD1-204ENST00000555737 BIN1O00499 593 aa20.93■□□□□ 0.94
RCCD1-204ENST00000555737 ME1P48163 572 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms