RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
SNX6-205ENST00000555648 DBF4Q9UBU7 674 aaPredicted RBP20.04■□□□□ 0.8
SNX6-205ENST00000555648 SBF1O95248 1867 aa20.04■□□□□ 0.8
SNX6-205ENST00000555648 DDNO94850 711 aaPredicted RBP20.03■□□□□ 0.8
SNX6-205ENST00000555648 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
SNX6-205ENST00000555648 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
SNX6-205ENST00000555648 DUSP27Q5VZP5 1158 aa20.03■□□□□ 0.8
SNX6-205ENST00000555648 OLFM4Q6UX06 510 aa20.03■□□□□ 0.8
SNX6-205ENST00000555648 CRAMP1Q96RY5 1269 aa20.03■□□□□ 0.8
SNX6-205ENST00000555648 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 SLX4Q8IY92 1834 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 IQCA1LA6NCM1 817 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
SNX6-205ENST00000555648 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.8
SNX6-205ENST00000555648 GNAI1P63096 354 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 TCIRG1Q13488 830 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 JDP2Q8WYK2 163 aa20.02■□□□□ 0.8
SNX6-205ENST00000555648 TRMT112Q9UI30 125 aaKnown RBP20.02■□□□□ 0.8
SNX6-205ENST00000555648 TNRC6CQ9HCJ0 1690 aaKnown RBP20.02■□□□□ 0.8
SNX6-205ENST00000555648 PPEF1O14829 653 aaPredicted RBP20.01■□□□□ 0.79
SNX6-205ENST00000555648 MBIPQ9NS73 344 aa20.01■□□□□ 0.79
SNX6-205ENST00000555648 IFT57Q9NWB7 429 aa20.01■□□□□ 0.79
SNX6-205ENST00000555648 HYPKQ9NX55 129 aa20.01■□□□□ 0.79
SNX6-205ENST00000555648 RIC1Q4ADV7 1423 aa20.01■□□□□ 0.79
SNX6-205ENST00000555648 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
SNX6-205ENST00000555648 NLRP10Q86W26 655 aa20■□□□□ 0.79
SNX6-205ENST00000555648 PSMD1Q99460 953 aa20■□□□□ 0.79
SNX6-205ENST00000555648 ANKRD13DQ6ZTN6 518 aa19.99■□□□□ 0.79
SNX6-205ENST00000555648 PLBD2Q8NHP8 589 aa19.99■□□□□ 0.79
SNX6-205ENST00000555648 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
SNX6-205ENST00000555648 SH3TC1Q8TE82 1336 aa19.99■□□□□ 0.79
SNX6-205ENST00000555648 POTECB2RU33 542 aa19.98■□□□□ 0.79
SNX6-205ENST00000555648 TIAM2Q8IVF5 1701 aa19.98■□□□□ 0.79
SNX6-205ENST00000555648 FER1L6Q2WGJ9 1857 aa19.97■□□□□ 0.79
SNX6-205ENST00000555648 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
SNX6-205ENST00000555648 EIF6P56537 245 aaKnown RBP19.97■□□□□ 0.79
SNX6-205ENST00000555648 HTRA3P83110 453 aa19.97■□□□□ 0.79
SNX6-205ENST00000555648 C3orf67Q6ZVT6 689 aa19.97■□□□□ 0.79
SNX6-205ENST00000555648 DDX46Q7L014 1031 aaKnown RBP19.97■□□□□ 0.79
SNX6-205ENST00000555648 LARGE2Q8N3Y3 721 aa19.97■□□□□ 0.79
SNX6-205ENST00000555648 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
SNX6-205ENST00000555648 ANP32CO43423 234 aa19.96■□□□□ 0.79
SNX6-205ENST00000555648 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
SNX6-205ENST00000555648 GOLGA2Q08379 1002 aa19.96■□□□□ 0.79
SNX6-205ENST00000555648 CHADLQ6NUI6 762 aa19.96■□□□□ 0.79
SNX6-205ENST00000555648 NUP98P52948 1817 aa19.96■□□□□ 0.79
SNX6-205ENST00000555648 BBOX1O75936 387 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 RIC3Q7Z5B4 369 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 DNAJC5GQ8N7S2 189 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 KLRG1Q96E93 195 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
SNX6-205ENST00000555648 HACL1Q9UJ83 578 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 ARFGEF2Q9Y6D5 1785 aa19.95■□□□□ 0.78
SNX6-205ENST00000555648 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
SNX6-205ENST00000555648 FZD9O00144 591 aa19.94■□□□□ 0.78
SNX6-205ENST00000555648 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
SNX6-205ENST00000555648 NIM1KQ8IY84 436 aa19.94■□□□□ 0.78
SNX6-205ENST00000555648 SUPT20HQ8NEM7 779 aa19.94■□□□□ 0.78
SNX6-205ENST00000555648 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
SNX6-205ENST00000555648 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
SNX6-205ENST00000555648 WDR90Q96KV7 1748 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 LDHDQ86WU2 507 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 ZNF428Q96B54 188 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 TAF1DQ9H5J8 278 aaPredicted RBP19.93■□□□□ 0.78
SNX6-205ENST00000555648 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 CLEC11AQ9Y240 323 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 GJA3Q9Y6H8 435 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 ABCC4O15439 1325 aa19.93■□□□□ 0.78
SNX6-205ENST00000555648 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
SNX6-205ENST00000555648 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
SNX6-205ENST00000555648 LMOD1P29536 600 aaPredicted RBP19.92■□□□□ 0.78
SNX6-205ENST00000555648 CCDC30Q5VVM6 783 aa19.92■□□□□ 0.78
SNX6-205ENST00000555648 GPC2Q8N158 579 aa19.92■□□□□ 0.78
SNX6-205ENST00000555648 DDX58O95786 925 aaKnown RBP19.91■□□□□ 0.78
SNX6-205ENST00000555648 HSP90B1P14625 803 aaKnown RBP19.91■□□□□ 0.78
SNX6-205ENST00000555648 EPHX2P34913 555 aa19.91■□□□□ 0.78
SNX6-205ENST00000555648 GRAPQ13588 217 aa19.91■□□□□ 0.78
SNX6-205ENST00000555648 DPP8Q6V1X1 898 aaPredicted RBP19.91■□□□□ 0.78
SNX6-205ENST00000555648 PNMA8AQ86V59 439 aaPredicted RBP19.91■□□□□ 0.78
SNX6-205ENST00000555648 GRAPLQ8TC17 118 aaPredicted RBP19.91■□□□□ 0.78
SNX6-205ENST00000555648 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
SNX6-205ENST00000555648 CCDC184Q52MB2 194 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 TMC4Q7Z404 712 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 MPNDQ8N594 471 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 FAM89AQ96GI7 184 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 VPS33BQ9H267 617 aa19.9■□□□□ 0.78
SNX6-205ENST00000555648 POTEIP0CG38 1075 aa19.89■□□□□ 0.77
SNX6-205ENST00000555648 POTEJP0CG39 1038 aa19.89■□□□□ 0.77
SNX6-205ENST00000555648 RTL5Q5HYW3 569 aaPredicted RBP19.89■□□□□ 0.77
SNX6-205ENST00000555648 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.77
SNX6-205ENST00000555648 DICER1Q9UPY3 1922 aaKnown RBP19.88■□□□□ 0.77
SNX6-205ENST00000555648 TRIM28Q13263 835 aaKnown RBP19.88■□□□□ 0.77
SNX6-205ENST00000555648 AOC3Q16853 763 aa19.88■□□□□ 0.77
SNX6-205ENST00000555648 STK31Q9BXU1 1019 aa19.88■□□□□ 0.77
SNX6-205ENST00000555648 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
SNX6-205ENST00000555648 IRS4O14654 1257 aaPredicted RBP19.87■□□□□ 0.77
SNX6-205ENST00000555648 CCDC27Q2M243 656 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms