RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-216ENST00000555550 C21orf2O43822 256 aa8.73□□□□□ -1.01
SCFD1-216ENST00000555550 HIRAP54198 1017 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-216ENST00000555550 HDGFL1Q5TGJ6 251 aa8.73□□□□□ -1.01
SCFD1-216ENST00000555550 WWC1Q8IX03 1113 aa8.73□□□□□ -1.01
SCFD1-216ENST00000555550 ALDH16A1Q8IZ83 802 aa8.73□□□□□ -1.01
SCFD1-216ENST00000555550 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
SCFD1-216ENST00000555550 ELNP15502 786 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 POTEAQ6S8J7 498 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-216ENST00000555550 CHMP7Q8WUX9 453 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-216ENST00000555550 NGLY1Q96IV0 654 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-216ENST00000555550 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
SCFD1-216ENST00000555550 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
SCFD1-216ENST00000555550 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
SCFD1-216ENST00000555550 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
SCFD1-216ENST00000555550 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
SCFD1-216ENST00000555550 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-216ENST00000555550 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
SCFD1-216ENST00000555550 RAC1P63000 192 aa8.7□□□□□ -1.02
SCFD1-216ENST00000555550 PSAPL1Q6NUJ1 521 aa8.7□□□□□ -1.02
SCFD1-216ENST00000555550 NBPF11Q86T75 865 aa8.7□□□□□ -1.02
SCFD1-216ENST00000555550 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
SCFD1-216ENST00000555550 LENG1Q96BZ8 264 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-216ENST00000555550 M0R2N6 131 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 RAD21O60216 631 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 USP21Q9UK80 565 aa8.69□□□□□ -1.02
SCFD1-216ENST00000555550 ATP9BO43861 1147 aa8.68□□□□□ -1.02
SCFD1-216ENST00000555550 LGR5O75473 907 aa8.68□□□□□ -1.02
SCFD1-216ENST00000555550 DKK1O94907 266 aa8.68□□□□□ -1.02
SCFD1-216ENST00000555550 SCG3Q8WXD2 468 aaKnown RBP8.68□□□□□ -1.02
SCFD1-216ENST00000555550 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-216ENST00000555550 NAGPAQ9UK23 515 aa8.68□□□□□ -1.02
SCFD1-216ENST00000555550 RGS9O75916 674 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-216ENST00000555550 NRG1Q02297 640 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-216ENST00000555550 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
SCFD1-216ENST00000555550 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-216ENST00000555550 NFKB1P19838 968 aa8.66□□□□□ -1.02
SCFD1-216ENST00000555550 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-216ENST00000555550 SIX5Q8N196 739 aa8.66□□□□□ -1.02
SCFD1-216ENST00000555550 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
SCFD1-216ENST00000555550 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-216ENST00000555550 CCINQ13939 588 aa8.65□□□□□ -1.02
SCFD1-216ENST00000555550 CPB1P15086 417 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 RASA1P20936 1047 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 ILDR2Q71H61 639 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
SCFD1-216ENST00000555550 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
SCFD1-216ENST00000555550 LRP8Q14114 963 aa8.63□□□□□ -1.03
SCFD1-216ENST00000555550 STAG2Q8N3U4 1231 aa8.63□□□□□ -1.03
SCFD1-216ENST00000555550 HINFPQ9BQA5 517 aa8.63□□□□□ -1.03
SCFD1-216ENST00000555550 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-216ENST00000555550 DMGDHQ9UI17 866 aaKnown RBP8.63□□□□□ -1.03
SCFD1-216ENST00000555550 GRNP28799 593 aaKnown RBP8.62□□□□□ -1.03
SCFD1-216ENST00000555550 IREB2P48200 963 aaKnown RBP8.62□□□□□ -1.03
SCFD1-216ENST00000555550 PLAURQ03405 335 aa8.62□□□□□ -1.03
SCFD1-216ENST00000555550 HIF1AQ16665 826 aa8.62□□□□□ -1.03
SCFD1-216ENST00000555550 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
SCFD1-216ENST00000555550 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
SCFD1-216ENST00000555550 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
SCFD1-216ENST00000555550 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
SCFD1-216ENST00000555550 SEC13P55735 322 aa8.61□□□□□ -1.03
SCFD1-216ENST00000555550 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
SCFD1-216ENST00000555550 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
SCFD1-216ENST00000555550 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
SCFD1-216ENST00000555550 TGFBR3LH3BV60 316 aa8.6□□□□□ -1.03
SCFD1-216ENST00000555550 TARSP26639 723 aaKnown RBP8.6□□□□□ -1.03
SCFD1-216ENST00000555550 MLLT1Q03111 559 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-216ENST00000555550 RTN1Q16799 776 aa8.6□□□□□ -1.03
SCFD1-216ENST00000555550 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
SCFD1-216ENST00000555550 GRIK5Q16478 980 aa8.59□□□□□ -1.03
SCFD1-216ENST00000555550 PERM1Q5SV97 790 aa8.59□□□□□ -1.03
SCFD1-216ENST00000555550 IER5Q5VY09 327 aa8.59□□□□□ -1.03
SCFD1-216ENST00000555550 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
SCFD1-216ENST00000555550 LPIN3Q9BQK8 851 aa8.59□□□□□ -1.03
SCFD1-216ENST00000555550 NOS3P29474 1203 aa8.58□□□□□ -1.04
SCFD1-216ENST00000555550 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
SCFD1-216ENST00000555550 SASH3O75995 380 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 INPP5BP32019 993 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 IDH3AP50213 366 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 ELMSAN1Q6PJG2 1045 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 DHX32Q7L7V1 743 aaKnown RBP8.57□□□□□ -1.04
SCFD1-216ENST00000555550 IFT43Q96FT9 208 aa8.57□□□□□ -1.04
SCFD1-216ENST00000555550 DPYDQ12882 1025 aa8.56□□□□□ -1.04
SCFD1-216ENST00000555550 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
SCFD1-216ENST00000555550 MEGF10Q96KG7 1140 aa8.56□□□□□ -1.04
SCFD1-216ENST00000555550 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
SCFD1-216ENST00000555550 EPB42P16452 691 aa8.55□□□□□ -1.04
SCFD1-216ENST00000555550 PCSK7Q16549 785 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms