RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 ABHD17AQ96GS6 310 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 PLXNC1O60486 1568 aa9.37□□□□□ -0.91
LINC00643-203ENST00000555518 EPXP11678 715 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 COL8A1P27658 744 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 LINC00114Q6XXX2 140 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-203ENST00000555518 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 PCDHGC4Q9Y5F7 938 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 INO80Q9ULG1 1556 aaPredicted RBP9.36□□□□□ -0.91
LINC00643-203ENST00000555518 ZFYVE16Q7Z3T8 1539 aa9.36□□□□□ -0.91
LINC00643-203ENST00000555518 BNIP3LO60238 219 aa9.35□□□□□ -0.91
LINC00643-203ENST00000555518 KDM5CP41229 1560 aa9.35□□□□□ -0.91
LINC00643-203ENST00000555518 SCAPERQ9BY12 1400 aa9.35□□□□□ -0.91
LINC00643-203ENST00000555518 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
LINC00643-203ENST00000555518 POGZQ7Z3K3 1410 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
LINC00643-203ENST00000555518 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
LINC00643-203ENST00000555518 RTEL1-TNFRSF6BF6WH68 1400 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 C2CD2LO14523 706 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 CTBSQ01459 385 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 SNRKQ9NRH2 765 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 KIF15Q9NS87 1388 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 DENND4BO75064 1496 aaPredicted RBP9.33□□□□□ -0.92
LINC00643-203ENST00000555518 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
LINC00643-203ENST00000555518 ATP7AQ04656 1500 aa9.32□□□□□ -0.92
LINC00643-203ENST00000555518 HOXB4P17483 251 aaPredicted RBP9.32□□□□□ -0.92
LINC00643-203ENST00000555518 ADH6P28332 368 aa9.32□□□□□ -0.92
LINC00643-203ENST00000555518 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
LINC00643-203ENST00000555518 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
LINC00643-203ENST00000555518 ZCCHC2Q9C0B9 1178 aaKnown RBP9.32□□□□□ -0.92
LINC00643-203ENST00000555518 ZNF518AQ6AHZ1 1483 aa9.32□□□□□ -0.92
LINC00643-203ENST00000555518 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 RICTORQ6R327 1708 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 INHAP05111 366 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 TSPY4P0CV99 314 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 TSPY10P0CW01 314 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 DGKGP49619 791 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 KIDINS220Q9ULH0 1771 aa9.31□□□□□ -0.92
LINC00643-203ENST00000555518 TEX14Q8IWB6 1497 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 MLH3Q9UHC1 1453 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 ATXN7O15265 892 aaPredicted RBP9.3□□□□□ -0.92
LINC00643-203ENST00000555518 FURINP09958 794 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 DUOX2Q9NRD8 1548 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 TSPOAP1O95153 1857 aa9.3□□□□□ -0.92
LINC00643-203ENST00000555518 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
LINC00643-203ENST00000555518 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
LINC00643-203ENST00000555518 GDF10P55107 478 aa9.29□□□□□ -0.92
LINC00643-203ENST00000555518 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
LINC00643-203ENST00000555518 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
LINC00643-203ENST00000555518 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
LINC00643-203ENST00000555518 ZMYM4Q5VZL5 1548 aa9.29□□□□□ -0.92
LINC00643-203ENST00000555518 HECW2Q9P2P5 1572 aa9.29□□□□□ -0.92
LINC00643-203ENST00000555518 PZPP20742 1482 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 MAGI2Q86UL8 1455 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
LINC00643-203ENST00000555518 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
LINC00643-203ENST00000555518 SMTNP53814 917 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 CHSY3Q70JA7 882 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 SUV39H2Q9H5I1 410 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 ZDHHC3Q9NYG2 299 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 ERBINQ96RT1 1412 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 UNC13BO14795 1591 aa9.28□□□□□ -0.92
LINC00643-203ENST00000555518 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
LINC00643-203ENST00000555518 ATP4AP20648 1035 aa9.27□□□□□ -0.93
LINC00643-203ENST00000555518 Q8N3U1 123 aa9.27□□□□□ -0.93
LINC00643-203ENST00000555518 AIDAQ96BJ3 306 aa9.27□□□□□ -0.93
LINC00643-203ENST00000555518 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
LINC00643-203ENST00000555518 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
LINC00643-203ENST00000555518 SCNN1DP51172 638 aa9.26□□□□□ -0.93
LINC00643-203ENST00000555518 ARSJQ5FYB0 599 aaPredicted RBP9.26□□□□□ -0.93
LINC00643-203ENST00000555518 CD163Q86VB7 1156 aa9.26□□□□□ -0.93
LINC00643-203ENST00000555518 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
LINC00643-203ENST00000555518 DEPDC5O75140 1603 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 CDK2AP1O14519 115 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 RAPGEF3O95398 923 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 FAM157BP0CG42 384 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 MAPTP10636 758 aaKnown RBP9.25□□□□□ -0.93
LINC00643-203ENST00000555518 SOX11P35716 441 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 BRPF1P55201 1214 aaPredicted RBP9.25□□□□□ -0.93
LINC00643-203ENST00000555518 TNP2Q05952 138 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 LAMC2Q13753 1193 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 GJA3Q9Y6H8 435 aa9.25□□□□□ -0.93
LINC00643-203ENST00000555518 DHX29Q7Z478 1369 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms