RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
PRKCH-215ENST00000555382 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-215ENST00000555382 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
PRKCH-215ENST00000555382 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
PRKCH-215ENST00000555382 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
PRKCH-215ENST00000555382 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-215ENST00000555382 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
PRKCH-215ENST00000555382 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 FMNL2Q96PY5 1086 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-215ENST00000555382 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
PRKCH-215ENST00000555382 FZD9O00144 591 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 STARD3NLO95772 234 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 EPHX2P34913 555 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 DUSP27Q5VZP5 1158 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-215ENST00000555382 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-215ENST00000555382 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
PRKCH-215ENST00000555382 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
PRKCH-215ENST00000555382 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-215ENST00000555382 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRKCH-215ENST00000555382 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
PRKCH-215ENST00000555382 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-215ENST00000555382 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
PRKCH-215ENST00000555382 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-215ENST00000555382 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
PRKCH-215ENST00000555382 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
PRKCH-215ENST00000555382 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
PRKCH-215ENST00000555382 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
PRKCH-215ENST00000555382 A1BGP04217 495 aa12.39□□□□□ -0.43
PRKCH-215ENST00000555382 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-215ENST00000555382 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-215ENST00000555382 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-215ENST00000555382 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-215ENST00000555382 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
PRKCH-215ENST00000555382 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
PRKCH-215ENST00000555382 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-215ENST00000555382 KCNQ3O43525 872 aa12.38□□□□□ -0.43
PRKCH-215ENST00000555382 NPR1P16066 1061 aa12.38□□□□□ -0.43
PRKCH-215ENST00000555382 ST5P78524 1137 aa12.38□□□□□ -0.43
PRKCH-215ENST00000555382 GPC2Q8N158 579 aa12.38□□□□□ -0.43
PRKCH-215ENST00000555382 MIS18AQ9NYP9 233 aa12.38□□□□□ -0.43
PRKCH-215ENST00000555382 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
PRKCH-215ENST00000555382 SCNN1DP51172 638 aa12.37□□□□□ -0.43
PRKCH-215ENST00000555382 CST9Q5W186 159 aa12.37□□□□□ -0.43
PRKCH-215ENST00000555382 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
PRKCH-215ENST00000555382 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
PRKCH-215ENST00000555382 RGL2O15211 777 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 VAMP4O75379 141 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
PRKCH-215ENST00000555382 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
PRKCH-215ENST00000555382 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
PRKCH-215ENST00000555382 C8orf58Q8NAV2 365 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 PSMD1Q99460 953 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
PRKCH-215ENST00000555382 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
PRKCH-215ENST00000555382 EXOSC9Q06265 439 aaKnown RBP12.35□□□□□ -0.43
PRKCH-215ENST00000555382 TWISTNBQ3B726 338 aaPredicted RBP12.35□□□□□ -0.43
PRKCH-215ENST00000555382 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
PRKCH-215ENST00000555382 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
PRKCH-215ENST00000555382 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 CCDC30Q5VVM6 783 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-215ENST00000555382 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
PRKCH-215ENST00000555382 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-215ENST00000555382 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
PRKCH-215ENST00000555382 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 TRAF5O00463 557 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-215ENST00000555382 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
PRKCH-215ENST00000555382 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
PRKCH-215ENST00000555382 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-215ENST00000555382 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
PRKCH-215ENST00000555382 EPS15P42566 896 aa12.32□□□□□ -0.44
PRKCH-215ENST00000555382 ECE1P42892 770 aa12.32□□□□□ -0.44
PRKCH-215ENST00000555382 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
PRKCH-215ENST00000555382 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-215ENST00000555382 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
PRKCH-215ENST00000555382 AOC2O75106 756 aa12.31□□□□□ -0.44
PRKCH-215ENST00000555382 MAP2K2P36507 400 aa12.31□□□□□ -0.44
PRKCH-215ENST00000555382 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
PRKCH-215ENST00000555382 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms