RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 NTSR2O95665 410 aa26.21■■□□□ 1.79
FOXN3-209ENST00000555353 ERFEQ4G0M1 354 aa26.21■■□□□ 1.79
FOXN3-209ENST00000555353 MAP3K2Q9Y2U5 619 aa26.21■■□□□ 1.79
FOXN3-209ENST00000555353 PI4KAP2A4QPH2 592 aa26.2■■□□□ 1.79
FOXN3-209ENST00000555353 FKBP5Q13451 457 aaPredicted RBP26.2■■□□□ 1.79
FOXN3-209ENST00000555353 PI4KAP1Q8N8J0 262 aa26.2■■□□□ 1.79
FOXN3-209ENST00000555353 ISCA1Q9BUE6 129 aa26.2■■□□□ 1.79
FOXN3-209ENST00000555353 RNF123Q5XPI4 1314 aa26.2■■□□□ 1.78
FOXN3-209ENST00000555353 DALRD3Q5D0E6 543 aaKnown RBP26.2■■□□□ 1.78
FOXN3-209ENST00000555353 ZNF428Q96B54 188 aa26.2■■□□□ 1.78
FOXN3-209ENST00000555353 MYD88Q99836 296 aa26.2■■□□□ 1.78
FOXN3-209ENST00000555353 TRMT112Q9UI30 125 aaKnown RBP26.2■■□□□ 1.78
FOXN3-209ENST00000555353 COL11A2P13942 1736 aaPredicted RBP26.2■■□□□ 1.78
FOXN3-209ENST00000555353 ABCC12Q96J65 1359 aa26.19■■□□□ 1.78
FOXN3-209ENST00000555353 METTL22Q9BUU2 404 aaPredicted RBP26.19■■□□□ 1.78
FOXN3-209ENST00000555353 ZNF622Q969S3 477 aaKnown RBP eCLIP26.18■■□□□ 1.78
FOXN3-209ENST00000555353 ADCY9O60503 1353 aa26.18■■□□□ 1.78
FOXN3-209ENST00000555353 NEXNQ0ZGT2 675 aa26.17■■□□□ 1.78
FOXN3-209ENST00000555353 TRIM28Q13263 835 aaKnown RBP26.17■■□□□ 1.78
FOXN3-209ENST00000555353 ARFGEF1Q9Y6D6 1849 aa26.17■■□□□ 1.78
FOXN3-209ENST00000555353 CT47B1P0C2W7 299 aaPredicted RBP26.16■■□□□ 1.78
FOXN3-209ENST00000555353 SRGNP10124 158 aa26.16■■□□□ 1.78
FOXN3-209ENST00000555353 TTLL6Q8N841 843 aa26.16■■□□□ 1.78
FOXN3-209ENST00000555353 SH3TC1Q8TE82 1336 aa26.16■■□□□ 1.78
FOXN3-209ENST00000555353 TNRC6CQ9HCJ0 1690 aaKnown RBP26.16■■□□□ 1.78
FOXN3-209ENST00000555353 MASTLQ96GX5 879 aa26.16■■□□□ 1.78
FOXN3-209ENST00000555353 RIC1Q4ADV7 1423 aa26.15■■□□□ 1.78
FOXN3-209ENST00000555353 CHD4Q14839 1912 aa26.15■■□□□ 1.78
FOXN3-209ENST00000555353 KLRG2A4D1S0 409 aaPredicted RBP26.15■■□□□ 1.78
FOXN3-209ENST00000555353 STYK1Q6J9G0 422 aa26.14■■□□□ 1.78
FOXN3-209ENST00000555353 CCDC191Q8NCU4 936 aa26.14■■□□□ 1.78
FOXN3-209ENST00000555353 CACNA1SQ13698 1873 aa26.14■■□□□ 1.77
FOXN3-209ENST00000555353 NPR1P16066 1061 aa26.13■■□□□ 1.77
FOXN3-209ENST00000555353 DNAAF4Q8WXU2 420 aa26.13■■□□□ 1.77
FOXN3-209ENST00000555353 CNKSR1Q969H4 720 aa26.13■■□□□ 1.77
FOXN3-209ENST00000555353 CWC25Q9NXE8 425 aaPredicted RBP26.13■■□□□ 1.77
FOXN3-209ENST00000555353 SLC10A5Q5PT55 438 aa26.12■■□□□ 1.77
FOXN3-209ENST00000555353 SSH1Q8WYL5 1049 aa26.12■■□□□ 1.77
FOXN3-209ENST00000555353 NLRP3Q96P20 1036 aa26.12■■□□□ 1.77
FOXN3-209ENST00000555353 ALDH1L2Q3SY69 923 aa26.12■■□□□ 1.77
FOXN3-209ENST00000555353 MRPL50Q8N5N7 158 aaKnown RBP26.12■■□□□ 1.77
FOXN3-209ENST00000555353 FAM89AQ96GI7 184 aa26.12■■□□□ 1.77
FOXN3-209ENST00000555353 SYNE4Q8N205 404 aa26.11■■□□□ 1.77
FOXN3-209ENST00000555353 RPGRQ92834 1020 aaKnown RBP26.11■■□□□ 1.77
FOXN3-209ENST00000555353 BCL2L13Q9BXK5 485 aa26.11■■□□□ 1.77
FOXN3-209ENST00000555353 SMC4Q9NTJ3 1288 aa26.11■■□□□ 1.77
FOXN3-209ENST00000555353 HCLS1P14317 486 aaPredicted RBP26.1■■□□□ 1.77
FOXN3-209ENST00000555353 CRY2Q49AN0 593 aa26.1■■□□□ 1.77
FOXN3-209ENST00000555353 RTL5Q5HYW3 569 aaPredicted RBP26.1■■□□□ 1.77
FOXN3-209ENST00000555353 ZBTB38Q8NAP3 1195 aaPredicted RBP26.1■■□□□ 1.77
FOXN3-209ENST00000555353 F6X3S4 739 aa26.08■■□□□ 1.77
FOXN3-209ENST00000555353 IGKV5-2P06315 115 aa26.08■■□□□ 1.77
FOXN3-209ENST00000555353 CWF19L2Q2TBE0 894 aaKnown RBP26.08■■□□□ 1.77
FOXN3-209ENST00000555353 ARHGAP27Q6ZUM4 889 aa26.08■■□□□ 1.77
FOXN3-209ENST00000555353 LAMB2P55268 1798 aa26.08■■□□□ 1.77
FOXN3-209ENST00000555353 SLX4Q8IY92 1834 aa26.08■■□□□ 1.77
FOXN3-209ENST00000555353 NEURL1BA8MQ27 555 aa26.07■■□□□ 1.76
FOXN3-209ENST00000555353 ALDH1B1P30837 517 aa26.07■■□□□ 1.76
FOXN3-209ENST00000555353 DDX60Q8IY21 1712 aaKnown RBP26.07■■□□□ 1.76
FOXN3-209ENST00000555353 HSP90B1P14625 803 aaKnown RBP26.07■■□□□ 1.76
FOXN3-209ENST00000555353 PRPF40BQ6NWY9 871 aaKnown RBP26.07■■□□□ 1.76
FOXN3-209ENST00000555353 C3orf67Q6ZVT6 689 aa26.07■■□□□ 1.76
FOXN3-209ENST00000555353 PTPRCP08575 1304 aa26.06■■□□□ 1.76
FOXN3-209ENST00000555353 IRS4O14654 1257 aaPredicted RBP26.06■■□□□ 1.76
FOXN3-209ENST00000555353 PCCAP05165 728 aaPredicted RBP26.06■■□□□ 1.76
FOXN3-209ENST00000555353 LINS1Q8NG48 757 aa26.06■■□□□ 1.76
FOXN3-209ENST00000555353 RBM17Q96I25 401 aaKnown RBP26.05■■□□□ 1.76
FOXN3-209ENST00000555353 ZNF219Q9P2Y4 722 aaPredicted RBP26.04■■□□□ 1.76
FOXN3-209ENST00000555353 C21orf2O43822 256 aa26.03■■□□□ 1.76
FOXN3-209ENST00000555353 HOXA10P31260 410 aaPredicted RBP26.03■■□□□ 1.76
FOXN3-209ENST00000555353 SLC4A10Q6U841 1118 aa26.03■■□□□ 1.76
FOXN3-209ENST00000555353 RARSP54136 660 aaKnown RBP26.03■■□□□ 1.76
FOXN3-209ENST00000555353 JARID2Q92833 1246 aaPredicted RBP26.03■■□□□ 1.76
FOXN3-209ENST00000555353 GCKRQ14397 625 aa26.02■■□□□ 1.76
FOXN3-209ENST00000555353 CRAMP1Q96RY5 1269 aa26.02■■□□□ 1.76
FOXN3-209ENST00000555353 YY1P25490 414 aa26.01■■□□□ 1.75
FOXN3-209ENST00000555353 BEND3Q5T5X7 828 aa26.01■■□□□ 1.75
FOXN3-209ENST00000555353 SOGA3Q5TF21 947 aa26.01■■□□□ 1.75
FOXN3-209ENST00000555353 CDHR2Q9BYE9 1310 aa25.99■■□□□ 1.75
FOXN3-209ENST00000555353 BRPF1P55201 1214 aaPredicted RBP25.99■■□□□ 1.75
FOXN3-209ENST00000555353 DDX46Q7L014 1031 aaKnown RBP25.99■■□□□ 1.75
FOXN3-209ENST00000555353 UBE3BQ7Z3V4 1068 aa25.99■■□□□ 1.75
FOXN3-209ENST00000555353 PDE8AO60658 829 aa25.99■■□□□ 1.75
FOXN3-209ENST00000555353 SF3B3Q15393 1217 aaKnown RBP25.99■■□□□ 1.75
FOXN3-209ENST00000555353 MYH3P11055 1940 aa25.98■■□□□ 1.75
FOXN3-209ENST00000555353 H7C1W4 665 aa25.98■■□□□ 1.75
FOXN3-209ENST00000555353 SRCIN1Q9C0H9 1055 aa25.98■■□□□ 1.75
FOXN3-209ENST00000555353 ABCC4O15439 1325 aa25.97■■□□□ 1.75
FOXN3-209ENST00000555353 KIF16BQ96L93 1317 aa25.97■■□□□ 1.75
FOXN3-209ENST00000555353 ALDH1L1O75891 902 aa25.97■■□□□ 1.75
FOXN3-209ENST00000555353 NOB1Q9ULX3 412 aaKnown RBP25.97■■□□□ 1.75
FOXN3-209ENST00000555353 CCDC93Q567U6 631 aa25.96■■□□□ 1.75
FOXN3-209ENST00000555353 C7orf43Q8WVR3 580 aa25.96■■□□□ 1.75
FOXN3-209ENST00000555353 FER1L6Q2WGJ9 1857 aa25.96■■□□□ 1.75
FOXN3-209ENST00000555353 TAF1P21675 1872 aa25.96■■□□□ 1.75
FOXN3-209ENST00000555353 PPEF1O14829 653 aaPredicted RBP25.95■■□□□ 1.75
FOXN3-209ENST00000555353 RCAN3Q9UKA8 241 aa25.95■■□□□ 1.75
FOXN3-209ENST00000555353 SBF1O95248 1867 aa25.95■■□□□ 1.74
FOXN3-209ENST00000555353 CCDC152Q4G0S7 254 aa25.95■■□□□ 1.74
FOXN3-209ENST00000555353 RASSF7Q02833 373 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms