RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 RAD50Q92878 1312 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 ABCC6O95255 1503 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 SGSM2O43147 1006 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 TTC14Q96N46 770 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 UTYO14607 1347 aa12.72□□□□□ -0.37
MTHFD1-210ENST00000555252 FAM193AP78312 1265 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 ARID3AQ99856 593 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 KCNF1Q9H3M0 494 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
MTHFD1-210ENST00000555252 SMTNL1A8MU46 457 aa12.71□□□□□ -0.38
MTHFD1-210ENST00000555252 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.38
MTHFD1-210ENST00000555252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.384e-7■■□□□ 12.7
MTHFD1-210ENST00000555252 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.38
MTHFD1-210ENST00000555252 PAXBP1Q9Y5B6 917 aa12.71□□□□□ -0.38
MTHFD1-210ENST00000555252 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
MTHFD1-210ENST00000555252 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
MTHFD1-210ENST00000555252 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
MTHFD1-210ENST00000555252 ELP1O95163 1332 aa12.7□□□□□ -0.38
MTHFD1-210ENST00000555252 SYT1P21579 422 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 RAPGEF4Q8WZA2 1011 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 ERBB3P21860 1342 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
MTHFD1-210ENST00000555252 GRM8O00222 908 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 HIP1O00291 1037 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 CAVIN2O95810 425 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 ANXA1P04083 346 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 TSC1Q92574 1164 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
MTHFD1-210ENST00000555252 DCCP43146 1447 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 MYH15Q9Y2K3 1946 aa12.67□□□□□ -0.38
MTHFD1-210ENST00000555252 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 NCBP1Q09161 790 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■□□ 16.9
MTHFD1-210ENST00000555252 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 NPHP3Q7Z494 1330 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 FIBPO43427 364 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.386e-7■■■■□ 19.4
MTHFD1-210ENST00000555252 CDC25BP30305 580 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 AK2P54819 239 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-210ENST00000555252 AP5Z1O43299 807 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 NEMFO60524 1076 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 PHKG2P15735 406 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 ATF3P18847 181 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 PDIA6Q15084 440 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 KCNB2Q92953 911 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 IL25Q9H293 177 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
MTHFD1-210ENST00000555252 KRT85P78386 507 aa12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 RUFY3Q7L099 469 aa12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 SUCLG2Q96I99 432 aa12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.39
MTHFD1-210ENST00000555252 PDCP20941 246 aa12.64□□□□□ -0.39
MTHFD1-210ENST00000555252 AACSQ86V21 672 aa12.64□□□□□ -0.39
MTHFD1-210ENST00000555252 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms