RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.5	□□□□□ -0.89
PSMC6-208	ENST00000554956	TNFRSF10B	O14763	440 aa		9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	CELA2B	P08218	269 aa	Predicted RBP	9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	HIF1A	Q16665	826 aa		9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	C11orf91	Q3C1V1	193 aa		9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	IER5	Q5VY09	327 aa		9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	UST	Q9Y2C2	406 aa		9.49	□□□□□ -0.89
PSMC6-208	ENST00000554956	PTCD1	O75127	700 aa	Known RBP	9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	GRN	P28799	593 aa	Known RBP	9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	IDH3A	P50213	366 aa		9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	LAMC2	Q13753	1193 aa		9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	FAM182B	Q5T319	152 aa		9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	IFT43	Q96FT9	208 aa		9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	SLC30A3	Q99726	388 aa		9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.48	□□□□□ -0.89
PSMC6-208	ENST00000554956	MICAL2	O94851	1124 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	PCBP4	P57723	403 aa	Known RBP	9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	C1orf229	Q6ZS94	237 aa	Predicted RBP	9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	ETFBKMT	Q8IXQ9	262 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	KLF15	Q9UIH9	416 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	GGA1	Q9UJY5	639 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	KCNH4	Q9UQ05	1017 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	USP20	Q9Y2K6	914 aa		9.46	□□□□□ -0.9
PSMC6-208	ENST00000554956	NEURL1B	A8MQ27	555 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	BCR	P11274	1271 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	SPEM2	Q0P670	501 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	TREML1	Q86YW5	311 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	STK17A	Q9UEE5	414 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	PRR12	Q9ULL5	1215 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	PEG3	Q9GZU2	1588 aa		9.45	□□□□□ -0.9
PSMC6-208	ENST00000554956	ARHGEF15	O94989	841 aa		9.44	□□□□□ -0.9
PSMC6-208	ENST00000554956	ARAF	P10398	606 aa		9.44	□□□□□ -0.9
PSMC6-208	ENST00000554956	INPP5B	P32019	993 aa		9.44	□□□□□ -0.9
PSMC6-208	ENST00000554956	KCNQ4	P56696	695 aa		9.44	□□□□□ -0.9
PSMC6-208	ENST00000554956	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMC6-208	ENST00000554956	OPLAH	O14841	1288 aa		9.43	□□□□□ -0.9
PSMC6-208	ENST00000554956	OIP5	O43482	229 aa		9.43	□□□□□ -0.9
PSMC6-208	ENST00000554956	MAP3K10	Q02779	954 aa		9.43	□□□□□ -0.9
PSMC6-208	ENST00000554956	GOLGA6L1	Q8N7Z2	621 aa		9.43	□□□□□ -0.9
PSMC6-208	ENST00000554956	SHISA8	B8ZZ34	492 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	ZBTB39	O15060	712 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	BRD2	P25440	801 aa	Known RBP	9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	ARSD	P51689	593 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	MTMR3	Q13615	1198 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	SLCO4C1	Q6ZQN7	724 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	SYT9	Q86SS6	491 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	FCHSD1	Q86WN1	690 aa		9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	GDF2	Q9UK05	429 aa	Predicted RBP	9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.42	□□□□□ -0.9
PSMC6-208	ENST00000554956	ADH6	P28332	368 aa		9.41	□□□□□ -0.9
PSMC6-208	ENST00000554956	RGL4	Q8IZJ4	473 aa		9.41	□□□□□ -0.9
PSMC6-208	ENST00000554956	GALNT6	Q8NCL4	622 aa		9.41	□□□□□ -0.9
PSMC6-208	ENST00000554956	BHMT	Q93088	406 aa		9.41	□□□□□ -0.9
PSMC6-208	ENST00000554956	ADAMTS8	Q9UP79	889 aa		9.41	□□□□□ -0.9
PSMC6-208	ENST00000554956	HELQ	Q8TDG4	1101 aa		9.4	□□□□□ -0.9
PSMC6-208	ENST00000554956	STIM2	Q9P246	746 aa		9.4	□□□□□ -0.9
PSMC6-208	ENST00000554956	RTCB	Q9Y3I0	505 aa	Known RBP	9.4	□□□□□ -0.9
PSMC6-208	ENST00000554956	FAM181B	A6NEQ2	426 aa		9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	EPX	P11678	715 aa		9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	EDARADD	Q8WWZ3	215 aa		9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	GSX2	Q9BZM3	304 aa		9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	ANO2	Q9NQ90	1003 aa		9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	AVEN	Q9NQS1	362 aa	Predicted RBP	9.39	□□□□□ -0.91
PSMC6-208	ENST00000554956	CADPS	Q9ULU8	1353 aa		9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	THOC2	Q8NI27	1593 aa	Known RBP	9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	EPB42	P16452	691 aa		9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	ZAP70	P43403	619 aa		9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	ZNF211	Q13398	564 aa	Predicted RBP	9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	KRT25	Q7Z3Z0	450 aa		9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	CMTR1	Q8N1G2	835 aa	Known RBP	9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	NEDD1	Q8NHV4	660 aa		9.38	□□□□□ -0.91
PSMC6-208	ENST00000554956	ABL1	P00519	1130 aa		9.37	□□□□□ -0.91
PSMC6-208	ENST00000554956	NFKB1	P19838	968 aa		9.37	□□□□□ -0.91
PSMC6-208	ENST00000554956	CCIN	Q13939	588 aa		9.37	□□□□□ -0.91
PSMC6-208	ENST00000554956	ATCAY	Q86WG3	371 aa		9.37	□□□□□ -0.91
PSMC6-208	ENST00000554956	LAMC3	Q9Y6N6	1575 aa		9.37	□□□□□ -0.91
PSMC6-208	ENST00000554956	SIN3B	O75182	1162 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	MPST	P25325	297 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	SERPINB4	P48594	390 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	TRIP4	Q15650	581 aa	Predicted RBP	9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	B4GALNT3	Q6L9W6	998 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	ABTB2	Q8N961	1025 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	KCNMB2	Q9Y691	235 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	PDS5B	Q9NTI5	1447 aa		9.36	□□□□□ -0.91
PSMC6-208	ENST00000554956	SASH3	O75995	380 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	TBC1D8B	Q0IIM8	1120 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	GPR152	Q8TDT2	470 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	PNMA5	Q96PV4	448 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	MDFI	Q99750	246 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	ENAM	Q9NRM1	1142 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	LRRC4B	Q9NT99	713 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	ZFAT	Q9P243	1243 aa		9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMC6-208	ENST00000554956	XYLB	O75191	536 aa		9.34	□□□□□ -0.91
PSMC6-208	ENST00000554956	AMPD1	P23109	780 aa		9.34	□□□□□ -0.91
PSMC6-208	ENST00000554956	TARS	P26639	723 aa	Known RBP	9.34	□□□□□ -0.91
PSMC6-208	ENST00000554956	NEUROD1	Q13562	356 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms