RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-207ENST00000554927 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
TUBB3-207ENST00000554927 MAP2K2P36507 400 aa17.68■□□□□ 0.42
TUBB3-207ENST00000554927 SCNN1DP51172 638 aa17.68■□□□□ 0.42
TUBB3-207ENST00000554927 HLFQ16534 295 aa17.68■□□□□ 0.42
TUBB3-207ENST00000554927 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
TUBB3-207ENST00000554927 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
TUBB3-207ENST00000554927 MCOLN1Q9GZU1 580 aa17.68■□□□□ 0.42
TUBB3-207ENST00000554927 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 RGL2O15211 777 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
TUBB3-207ENST00000554927 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 NGEFQ8N5V2 710 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
TUBB3-207ENST00000554927 THSD7BQ9C0I4 1608 aa17.66■□□□□ 0.42
TUBB3-207ENST00000554927 CA12O43570 354 aa17.66■□□□□ 0.42
TUBB3-207ENST00000554927 CELF2O95319 508 aaKnown RBP17.66■□□□□ 0.42
TUBB3-207ENST00000554927 MCM10Q7L590 875 aa17.66■□□□□ 0.42
TUBB3-207ENST00000554927 COL4A5P29400 1685 aa17.65■□□□□ 0.42
TUBB3-207ENST00000554927 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-207ENST00000554927 LTBP1Q14766 1721 aa17.65■□□□□ 0.42
TUBB3-207ENST00000554927 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
TUBB3-207ENST00000554927 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-207ENST00000554927 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
TUBB3-207ENST00000554927 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-207ENST00000554927 DGKZQ13574 1117 aa17.64■□□□□ 0.41
TUBB3-207ENST00000554927 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
TUBB3-207ENST00000554927 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
TUBB3-207ENST00000554927 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
TUBB3-207ENST00000554927 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
TUBB3-207ENST00000554927 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-207ENST00000554927 PPIP5K2O43314 1243 aa17.63■□□□□ 0.41
TUBB3-207ENST00000554927 SAPCD2Q86UD0 394 aa17.63■□□□□ 0.41
TUBB3-207ENST00000554927 RBM17Q96I25 401 aaKnown RBP17.63■□□□□ 0.41
TUBB3-207ENST00000554927 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
TUBB3-207ENST00000554927 AOC3Q16853 763 aa17.62■□□□□ 0.41
TUBB3-207ENST00000554927 GLIS2Q9BZE0 524 aaPredicted RBP17.62■□□□□ 0.41
TUBB3-207ENST00000554927 GPRC5DQ9NZD1 345 aa17.62■□□□□ 0.41
TUBB3-207ENST00000554927 GPTP24298 496 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 SLC51AQ86UW1 340 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
TUBB3-207ENST00000554927 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
TUBB3-207ENST00000554927 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
TUBB3-207ENST00000554927 CRAMP1Q96RY5 1269 aa17.6■□□□□ 0.41
TUBB3-207ENST00000554927 TRPM7Q96QT4 1865 aa17.59■□□□□ 0.41
TUBB3-207ENST00000554927 NPC1L1Q9UHC9 1359 aa17.59■□□□□ 0.41
TUBB3-207ENST00000554927 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-207ENST00000554927 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
TUBB3-207ENST00000554927 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 ERVV-1B6SEH8 477 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-207ENST00000554927 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
TUBB3-207ENST00000554927 HHIPL1Q96JK4 782 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
TUBB3-207ENST00000554927 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
TUBB3-207ENST00000554927 MYL6BP14649 208 aa17.57■□□□□ 0.4
TUBB3-207ENST00000554927 CXCL9Q07325 125 aa17.57■□□□□ 0.4
TUBB3-207ENST00000554927 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-207ENST00000554927 SUSD4Q5VX71 490 aa17.57■□□□□ 0.4
TUBB3-207ENST00000554927 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
TUBB3-207ENST00000554927 NOGQ13253 232 aa17.56■□□□□ 0.4
TUBB3-207ENST00000554927 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
TUBB3-207ENST00000554927 SUPT20HQ8NEM7 779 aa17.56■□□□□ 0.4
TUBB3-207ENST00000554927 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 RAD17O75943 681 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 CDC37L1Q7L3B6 337 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 CASP8AP2Q9UKL3 1982 aa17.55■□□□□ 0.4
TUBB3-207ENST00000554927 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-207ENST00000554927 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
TUBB3-207ENST00000554927 HUNKP57058 714 aa17.54■□□□□ 0.4
TUBB3-207ENST00000554927 TNIP1Q15025 636 aa17.54■□□□□ 0.4
TUBB3-207ENST00000554927 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-207ENST00000554927 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
TUBB3-207ENST00000554927 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
TUBB3-207ENST00000554927 ZC3H15Q8WU90 426 aaKnown RBP17.54■□□□□ 0.4
TUBB3-207ENST00000554927 NTSR2O95665 410 aa17.53■□□□□ 0.4
TUBB3-207ENST00000554927 SOX10P56693 466 aa17.53■□□□□ 0.4
TUBB3-207ENST00000554927 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
TUBB3-207ENST00000554927 ZIC5Q96T25 663 aa17.53■□□□□ 0.4
TUBB3-207ENST00000554927 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
TUBB3-207ENST00000554927 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
TUBB3-207ENST00000554927 USP48Q86UV5 1035 aa17.52■□□□□ 0.4
TUBB3-207ENST00000554927 CDHR2Q9BYE9 1310 aa17.51■□□□□ 0.39
TUBB3-207ENST00000554927 H7C1D1 291 aa17.51■□□□□ 0.39
TUBB3-207ENST00000554927 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
TUBB3-207ENST00000554927 MPNDQ8N594 471 aa17.51■□□□□ 0.39
TUBB3-207ENST00000554927 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
TUBB3-207ENST00000554927 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms