RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 DDR1Q08345 913 aa20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 GCKRQ14397 625 aa20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 CWF19L2Q2TBE0 894 aaKnown RBP20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 UTP14AQ9BVJ6 771 aaKnown RBP20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 SPON1Q9HCB6 807 aa20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
SPTLC2-203ENST00000554901 SERPINB2P05120 415 aa20.77■□□□□ 0.92
SPTLC2-203ENST00000554901 SUSD4Q5VX71 490 aa20.77■□□□□ 0.92
SPTLC2-203ENST00000554901 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
SPTLC2-203ENST00000554901 NTSR2O95665 410 aa20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 ZBTB38Q8NAP3 1195 aaPredicted RBP20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 SGIP1Q9BQI5 828 aa20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 TNNQ9UQP3 1299 aa20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 ATF5Q9Y2D1 282 aaPredicted RBP20.76■□□□□ 0.91
SPTLC2-203ENST00000554901 RLBP1P12271 317 aa20.75■□□□□ 0.91
SPTLC2-203ENST00000554901 HSP90B1P14625 803 aaKnown RBP20.75■□□□□ 0.91
SPTLC2-203ENST00000554901 TMEM57Q8N5G2 664 aa20.75■□□□□ 0.91
SPTLC2-203ENST00000554901 CNBD1Q8NA66 436 aa20.75■□□□□ 0.91
SPTLC2-203ENST00000554901 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
SPTLC2-203ENST00000554901 UTYO14607 1347 aa20.74■□□□□ 0.91
SPTLC2-203ENST00000554901 NRXN2Q9P2S2 1712 aa20.74■□□□□ 0.91
SPTLC2-203ENST00000554901 H7C1W4 665 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 GRM8O00222 908 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 PTGER2P43116 358 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 AFDNP55196 1824 aaKnown RBP20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 NPHP1O15259 732 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 CHMP4BQ9H444 224 aaKnown RBP20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 HDAC5Q9UQL6 1122 aa20.73■□□□□ 0.91
SPTLC2-203ENST00000554901 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 ST5P78524 1137 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 SLC10A5Q5PT55 438 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 PRR5LQ6MZQ0 368 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 DDX19BQ9UMR2 479 aa20.72■□□□□ 0.91
SPTLC2-203ENST00000554901 FAM177BA6PVY3 158 aa20.71■□□□□ 0.91
SPTLC2-203ENST00000554901 GNAI3P08754 354 aa20.7■□□□□ 0.9
SPTLC2-203ENST00000554901 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
SPTLC2-203ENST00000554901 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
SPTLC2-203ENST00000554901 CASP7P55210 303 aa20.69■□□□□ 0.9
SPTLC2-203ENST00000554901 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
SPTLC2-203ENST00000554901 COG6Q9Y2V7 657 aa20.69■□□□□ 0.9
SPTLC2-203ENST00000554901 ERFEQ4G0M1 354 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 BRIP1Q9BX63 1249 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 PLA2G12BQ9BX93 195 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 ZBTB7BO15156 539 aaPredicted RBP20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 PDZRN3Q9UPQ7 1066 aa20.68■□□□□ 0.9
SPTLC2-203ENST00000554901 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
SPTLC2-203ENST00000554901 ABCC12Q96J65 1359 aa20.66■□□□□ 0.9
SPTLC2-203ENST00000554901 MEIS3Q99687 375 aa20.66■□□□□ 0.9
SPTLC2-203ENST00000554901 KLRG2A4D1S0 409 aaPredicted RBP20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 PDE8AO60658 829 aa20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 PDE6BP35913 854 aa20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 AAMPQ13685 434 aa20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 NLRP3Q96P20 1036 aa20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
SPTLC2-203ENST00000554901 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.9
SPTLC2-203ENST00000554901 SYNE4Q8N205 404 aa20.64■□□□□ 0.9
SPTLC2-203ENST00000554901 LAMB2P55268 1798 aa20.64■□□□□ 0.89
SPTLC2-203ENST00000554901 HCLS1P14317 486 aaPredicted RBP20.63■□□□□ 0.89
SPTLC2-203ENST00000554901 GNAI2P04899 355 aa20.63■□□□□ 0.89
SPTLC2-203ENST00000554901 SF3B3Q15393 1217 aaKnown RBP20.63■□□□□ 0.89
SPTLC2-203ENST00000554901 JARID2Q92833 1246 aaPredicted RBP20.63■□□□□ 0.89
SPTLC2-203ENST00000554901 ZBTB40Q9NUA8 1239 aa20.63■□□□□ 0.89
SPTLC2-203ENST00000554901 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 LRP5O75197 1615 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 CTSWP56202 376 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 TGFB2P61812 414 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 CRY2Q49AN0 593 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 SUCLG2Q96I99 432 aa20.62■□□□□ 0.89
SPTLC2-203ENST00000554901 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
SPTLC2-203ENST00000554901 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
SPTLC2-203ENST00000554901 CCDC24Q8N4L8 307 aa20.61■□□□□ 0.89
SPTLC2-203ENST00000554901 CSF1RP07333 972 aa20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 FOXO4P98177 505 aa20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 CCDC152Q4G0S7 254 aa20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 CRBNQ96SW2 442 aa20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
SPTLC2-203ENST00000554901 TTLL11Q8NHH1 800 aa20.59■□□□□ 0.89
SPTLC2-203ENST00000554901 RTL9Q8NET4 1388 aa20.59■□□□□ 0.89
SPTLC2-203ENST00000554901 ANKRD31Q8N7Z5 1873 aa20.59■□□□□ 0.89
SPTLC2-203ENST00000554901 H0YIN7 160 aa20.58■□□□□ 0.89
SPTLC2-203ENST00000554901 BICC1Q9H694 974 aaKnown RBP20.58■□□□□ 0.89
SPTLC2-203ENST00000554901 LRRFIP2Q9Y608 721 aaKnown RBP20.58■□□□□ 0.89
SPTLC2-203ENST00000554901 SRGNP10124 158 aa20.58■□□□□ 0.88
SPTLC2-203ENST00000554901 MTX1Q13505 466 aa20.58■□□□□ 0.88
SPTLC2-203ENST00000554901 EPHA10Q5JZY3 1008 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms