RNA–Protein interactions for RNA: ENST00000554761.5

EFCAB11-205, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-205ENST00000554761 RALBP1Q15311 655 aa8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 IER5LQ5T953 404 aa8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 PNMA8AQ86V59 439 aaPredicted RBP8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 TMX4Q9H1E5 349 aaPredicted RBP8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
EFCAB11-205ENST00000554761 ANP32CO43423 234 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 KCNQ3O43525 872 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 POTEJP0CG39 1038 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 CCDC184Q52MB2 194 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 MCM10Q7L590 875 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 LDHDQ86WU2 507 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
EFCAB11-205ENST00000554761 ERBB4Q15303 1308 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 POTECB2RU33 542 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 SEC24BO95487 1268 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 PRELPP51888 382 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 JDP2Q8WYK2 163 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 VPS33BQ9H267 617 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 CEP350Q5VT06 3117 aa8.58□□□□□ -1.04
EFCAB11-205ENST00000554761 DDNO94850 711 aaPredicted RBP8.57□□□□□ -1.04
EFCAB11-205ENST00000554761 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
EFCAB11-205ENST00000554761 PSMD1Q99460 953 aa8.57□□□□□ -1.04
EFCAB11-205ENST00000554761 COL3A1P02461 1466 aaPredicted RBP8.57□□□□□ -1.04
EFCAB11-205ENST00000554761 KIF13BQ9NQT8 1826 aa8.57□□□□□ -1.04
EFCAB11-205ENST00000554761 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 MAPK8IP3Q9UPT6 1336 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 FZD9O00144 591 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 IARSP41252 1262 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 PSEN1P49768 467 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 HTRA3P83110 453 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 LMOD3Q0VAK6 560 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 CRY2Q49AN0 593 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 PARP10Q53GL7 1025 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 TNS4Q8IZW8 715 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 SYNE4Q8N205 404 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 RPGRQ92834 1020 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 RBM17Q96I25 401 aaKnown RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 TAF1DQ9H5J8 278 aaPredicted RBP8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 HACL1Q9UJ83 578 aa8.56□□□□□ -1.04
EFCAB11-205ENST00000554761 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 COL5A3P25940 1745 aaPredicted RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 PRAMEF22A3QJZ6 481 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 HSPA1AP0DMV8 641 aaKnown RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 HSPA1BP0DMV9 641 aaKnown RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 HOXA10P31260 410 aaPredicted RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 DCTN1Q14203 1278 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 GPC2Q8N158 579 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 NLRP3Q96P20 1036 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 CRAMP1Q96RY5 1269 aa8.55□□□□□ -1.04
EFCAB11-205ENST00000554761 IBTKQ9P2D0 1353 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 LMOD1P29536 600 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 EPHX2P34913 555 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 IRX5P78411 483 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 HLFQ16534 295 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 SUPT20HQ8NEM7 779 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 PLEKHF1Q96S99 279 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 ZNF277Q9NRM2 450 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
EFCAB11-205ENST00000554761 MYH14Q7Z406 1995 aaKnown RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 BBOX1O75936 387 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 PIP4K2AP48426 406 aaPredicted RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 SLC10A5Q5PT55 438 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 ZNF34Q8IZ26 560 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 CNTROBQ8N137 903 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 MIS18AQ9NYP9 233 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 TSPYL4Q9UJ04 414 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
EFCAB11-205ENST00000554761 TJP1Q07157 1748 aa8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 MAP2K1Q02750 393 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 USP50Q70EL3 339 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 TMC4Q7Z404 712 aa8.52□□□□□ -1.05
EFCAB11-205ENST00000554761 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms