RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZNF827Q17R98 1081 aa17.98■□□□□ 0.47
SHOX2-206ENST00000554685 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
SHOX2-206ENST00000554685 NLRP10Q86W26 655 aa17.98■□□□□ 0.47
SHOX2-206ENST00000554685 ANKRD36CQ5JPF3 1778 aa17.98■□□□□ 0.47
SHOX2-206ENST00000554685 H7C1W4 665 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 HMMRO75330 724 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 NBPF7P0C2Y1 421 aaPredicted RBP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 PPP1R42Q7Z4L9 355 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
SHOX2-206ENST00000554685 LRRFIP2Q9Y608 721 aaKnown RBP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 AFDNP55196 1824 aaKnown RBP17.97■□□□□ 0.47
SHOX2-206ENST00000554685 NUP98P52948 1817 aa17.96■□□□□ 0.47
SHOX2-206ENST00000554685 GPTP24298 496 aa17.96■□□□□ 0.47
SHOX2-206ENST00000554685 HDAC1Q13547 482 aaPredicted RBP17.96■□□□□ 0.47
SHOX2-206ENST00000554685 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
SHOX2-206ENST00000554685 ANKRD44Q8N8A2 993 aa17.96■□□□□ 0.47
SHOX2-206ENST00000554685 ZBTB38Q8NAP3 1195 aaPredicted RBP17.96■□□□□ 0.47
SHOX2-206ENST00000554685 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
SHOX2-206ENST00000554685 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
SHOX2-206ENST00000554685 CEP85Q6P2H3 762 aa17.95■□□□□ 0.46
SHOX2-206ENST00000554685 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
SHOX2-206ENST00000554685 UBE3BQ7Z3V4 1068 aa17.95■□□□□ 0.46
SHOX2-206ENST00000554685 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
SHOX2-206ENST00000554685 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
SHOX2-206ENST00000554685 CDHR2Q9BYE9 1310 aa17.95■□□□□ 0.46
SHOX2-206ENST00000554685 UPF1Q92900 1129 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHOX2-206ENST00000554685 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
SHOX2-206ENST00000554685 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
SHOX2-206ENST00000554685 NYXQ9GZU5 481 aa17.94■□□□□ 0.46
SHOX2-206ENST00000554685 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
SHOX2-206ENST00000554685 TRMT112Q9UI30 125 aaKnown RBP17.94■□□□□ 0.46
SHOX2-206ENST00000554685 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
SHOX2-206ENST00000554685 CASP7P55210 303 aa17.93■□□□□ 0.46
SHOX2-206ENST00000554685 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
SHOX2-206ENST00000554685 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
SHOX2-206ENST00000554685 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
SHOX2-206ENST00000554685 ATP8B2P98198 1209 aa17.92■□□□□ 0.46
SHOX2-206ENST00000554685 MTX1Q13505 466 aa17.92■□□□□ 0.46
SHOX2-206ENST00000554685 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
SHOX2-206ENST00000554685 GYS1P13807 737 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 COL23A1Q86Y22 540 aaPredicted RBP17.91■□□□□ 0.46
SHOX2-206ENST00000554685 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
SHOX2-206ENST00000554685 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
SHOX2-206ENST00000554685 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
SHOX2-206ENST00000554685 NTSR2O95665 410 aa17.9■□□□□ 0.46
SHOX2-206ENST00000554685 GCC1Q96CN9 775 aa17.9■□□□□ 0.46
SHOX2-206ENST00000554685 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
SHOX2-206ENST00000554685 BICC1Q9H694 974 aaKnown RBP17.9■□□□□ 0.46
SHOX2-206ENST00000554685 KDM2BQ8NHM5 1336 aa17.9■□□□□ 0.46
SHOX2-206ENST00000554685 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-206ENST00000554685 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-206ENST00000554685 TPTE2Q6XPS3 522 aa17.89■□□□□ 0.45
SHOX2-206ENST00000554685 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
SHOX2-206ENST00000554685 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-206ENST00000554685 SIRT2Q8IXJ6 389 aa17.89■□□□□ 0.45
SHOX2-206ENST00000554685 SRGAP3O43295 1099 aa17.88■□□□□ 0.45
SHOX2-206ENST00000554685 PDE8AO60658 829 aa17.88■□□□□ 0.45
SHOX2-206ENST00000554685 IGHDP01880 384 aa17.88■□□□□ 0.45
SHOX2-206ENST00000554685 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
SHOX2-206ENST00000554685 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
SHOX2-206ENST00000554685 COL24A1Q17RW2 1714 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 TUBGCP6Q96RT7 1819 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 NPHP1O15259 732 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 POLA2Q14181 598 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 NFIXQ14938 502 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
SHOX2-206ENST00000554685 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
SHOX2-206ENST00000554685 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
SHOX2-206ENST00000554685 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
SHOX2-206ENST00000554685 TM4SF1P30408 202 aa17.86■□□□□ 0.45
SHOX2-206ENST00000554685 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
SHOX2-206ENST00000554685 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
SHOX2-206ENST00000554685 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 CTSWP56202 376 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 FOXO4P98177 505 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 EPHA10Q5JZY3 1008 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 LMBR1LQ6UX01 489 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 DCTPP1Q9H773 170 aa17.85■□□□□ 0.45
SHOX2-206ENST00000554685 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-206ENST00000554685 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
SHOX2-206ENST00000554685 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
SHOX2-206ENST00000554685 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
SHOX2-206ENST00000554685 CSF1RP07333 972 aa17.83■□□□□ 0.44
SHOX2-206ENST00000554685 ST5P78524 1137 aa17.83■□□□□ 0.44
SHOX2-206ENST00000554685 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
SHOX2-206ENST00000554685 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
SHOX2-206ENST00000554685 SERPINB2P05120 415 aa17.82■□□□□ 0.44
SHOX2-206ENST00000554685 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
SHOX2-206ENST00000554685 ERFEQ4G0M1 354 aa17.82■□□□□ 0.44
SHOX2-206ENST00000554685 CCDC152Q4G0S7 254 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms