RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 E9PCH4 1651 aa7.28□□□□□ -1.24
ATXN3-229ENST00000554672 NEUROD2Q15784 382 aa7.27□□□□□ -1.25
ATXN3-229ENST00000554672 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
ATXN3-229ENST00000554672 TSEN34Q9BSV6 310 aaKnown RBP7.27□□□□□ -1.25
ATXN3-229ENST00000554672 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-229ENST00000554672 UPP2O95045 317 aa7.26□□□□□ -1.25
ATXN3-229ENST00000554672 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-229ENST00000554672 CDV3Q9UKY7 258 aaKnown RBP7.26□□□□□ -1.25
ATXN3-229ENST00000554672 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
ATXN3-229ENST00000554672 ABCC11Q96J66 1382 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 PPFIA3O75145 1194 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 VSIG8P0DPA2 414 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
ATXN3-229ENST00000554672 PCMTD1Q96MG8 357 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-229ENST00000554672 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 TMPRSS4Q9NRS4 437 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 NEXMIFQ5QGS0 1516 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 NAIPQ13075 1403 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 GLI3P10071 1580 aa7.25□□□□□ -1.25
ATXN3-229ENST00000554672 SBNO1A3KN83 1393 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 LRP5O75197 1615 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 SPINT1O43278 529 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 NBPF8Q3BBV2 869 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 TMEM259Q4ZIN3 620 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 TMEM132EQ6IEE7 984 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 FAM196AQ6ZSG2 479 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 AGBL1Q96MI9 1066 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 ADGRF5Q8IZF2 1346 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
ATXN3-229ENST00000554672 ARHGEF10O15013 1369 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 EP400Q96L91 3159 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 FIGNL2A6NMB9 653 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 TTLL8A6PVC2 850 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 APBA3O96018 575 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 FAM182BQ5T319 152 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
ATXN3-229ENST00000554672 PLEKHH1Q9ULM0 1364 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 TNS3Q68CZ2 1445 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 ESPNB1AK53 854 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 LILRA1O75019 489 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 TRIM37O94972 964 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 ADD1P35611 737 aaKnown RBP7.22□□□□□ -1.25
ATXN3-229ENST00000554672 DHX9Q08211 1270 aaKnown RBP7.22□□□□□ -1.25
ATXN3-229ENST00000554672 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
ATXN3-229ENST00000554672 KDF1Q8NAX2 398 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-229ENST00000554672 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-229ENST00000554672 TECPR2O15040 1411 aa7.21□□□□□ -1.25
ATXN3-229ENST00000554672 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.26
ATXN3-229ENST00000554672 KCNQ2O43526 872 aa7.21□□□□□ -1.26
ATXN3-229ENST00000554672 CTSOP43234 321 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-229ENST00000554672 RAB15P59190 212 aa7.21□□□□□ -1.26
ATXN3-229ENST00000554672 ZNF784Q8NCA9 323 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-229ENST00000554672 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
ATXN3-229ENST00000554672 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATXN3-229ENST00000554672 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 GPR37L1O60883 481 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 RELBQ01201 579 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 PTSQ03393 145 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.2□□□□□ -1.26
ATXN3-229ENST00000554672 NBPF20Q3BBV1 942 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 DZIP3Q86Y13 1208 aaKnown RBP7.2□□□□□ -1.26
ATXN3-229ENST00000554672 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
ATXN3-229ENST00000554672 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 INSM2Q96T92 566 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-229ENST00000554672 C14orf93Q9H972 538 aaKnown RBP7.2□□□□□ -1.26
ATXN3-229ENST00000554672 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
ATXN3-229ENST00000554672 SPHKAPQ2M3C7 1700 aa7.19□□□□□ -1.26
ATXN3-229ENST00000554672 FBXO45P0C2W1 286 aa7.19□□□□□ -1.26
ATXN3-229ENST00000554672 ZNF395Q9H8N7 513 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-229ENST00000554672 PRDM11Q9NQV5 511 aa7.19□□□□□ -1.26
ATXN3-229ENST00000554672 GPRASP1Q5JY77 1395 aa7.19□□□□□ -1.26
ATXN3-229ENST00000554672 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
ATXN3-229ENST00000554672 ZBBXA8MT70 800 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 POGKQ9P215 609 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
ATXN3-229ENST00000554672 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
ATXN3-229ENST00000554672 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
ATXN3-229ENST00000554672 GIGYF1O75420 1035 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-229ENST00000554672 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-229ENST00000554672 KRT76Q01546 638 aa7.17□□□□□ -1.26
ATXN3-229ENST00000554672 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-229ENST00000554672 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
ATXN3-229ENST00000554672 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
ATXN3-229ENST00000554672 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
ATXN3-229ENST00000554672 SLC35F4A4IF30 521 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 ADH1AP07327 375 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 PPARGC1BQ86YN6 1023 aaKnown RBP7.16□□□□□ -1.26
ATXN3-229ENST00000554672 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms