RNA–Protein interactions for RNA: ENST00000554572.5

ESR2-208, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best) BASIC

Gene ESR2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-208ENST00000554572 ATP7BP35670 1465 aa12.88□□□□□ -0.35
ESR2-208ENST00000554572 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
ESR2-208ENST00000554572 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
ESR2-208ENST00000554572 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
ESR2-208ENST00000554572 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
ESR2-208ENST00000554572 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
ESR2-208ENST00000554572 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
ESR2-208ENST00000554572 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 ME1P48163 572 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
ESR2-208ENST00000554572 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 CCDC73Q6ZRK6 1079 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 BRF1Q92994 677 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
ESR2-208ENST00000554572 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 TLR7Q9NYK1 1049 aaKnown RBP12.86□□□□□ -0.35
ESR2-208ENST00000554572 FLT4P35916 1363 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 NR1I2O75469 434 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 BIN1O00499 593 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
ESR2-208ENST00000554572 TPM3P06753 285 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 TTC14Q96N46 770 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
ESR2-208ENST00000554572 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
ESR2-208ENST00000554572 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 CLTCQ00610 1675 aaKnown RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 SMC2O95347 1197 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 TCHHQ07283 1943 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 CRB1P82279 1406 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 SLC27A2O14975 620 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 CHGBP05060 677 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
ESR2-208ENST00000554572 MRVI1Q9Y6F6 885 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
ESR2-208ENST00000554572 HOXC9P31274 260 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 PSME1Q06323 249 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 NEXNQ0ZGT2 675 aa12.84□□□□□ -0.35
ESR2-208ENST00000554572 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
ESR2-208ENST00000554572 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
ESR2-208ENST00000554572 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
ESR2-208ENST00000554572 PRDM4Q9UKN5 801 aa12.83□□□□□ -0.36
ESR2-208ENST00000554572 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
ESR2-208ENST00000554572 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
ESR2-208ENST00000554572 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 SETD1BQ9UPS6 1966 aaKnown RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 SKILP12757 684 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 LTKP29376 864 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 Q6ZUG5 572 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 TMX1Q9H3N1 280 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 CCAR1Q8IX12 1150 aaKnown RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 NCOA5Q9HCD5 579 aaKnown RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
ESR2-208ENST00000554572 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
ESR2-208ENST00000554572 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 ZNF75DP51815 510 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 ANKRD1Q15327 319 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 ZSCAN25Q6NSZ9 544 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 MYD88Q99836 296 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 DDX19AQ9NUU7 478 aaKnown RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 DDX58O95786 925 aaKnown RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 CCAR2Q8N163 923 aaKnown RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
ESR2-208ENST00000554572 TMEM87AQ8NBN3 555 aa12.81□□□□□ -0.36
ESR2-208ENST00000554572 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
ESR2-208ENST00000554572 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
ESR2-208ENST00000554572 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms