RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
PTPN21-204ENST00000554178 EPHX2P34913 555 aa13.05□□□□□ -0.32
PTPN21-204ENST00000554178 FKBP4Q02790 459 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN21-204ENST00000554178 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN21-204ENST00000554178 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
PTPN21-204ENST00000554178 MCM10Q7L590 875 aa13.05□□□□□ -0.32
PTPN21-204ENST00000554178 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
PTPN21-204ENST00000554178 TEX13AQ9BXU3 409 aaPredicted RBP13.05□□□□□ -0.32
PTPN21-204ENST00000554178 HACL1Q9UJ83 578 aa13.05□□□□□ -0.32
PTPN21-204ENST00000554178 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN21-204ENST00000554178 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
PTPN21-204ENST00000554178 NPR1P16066 1061 aa13.04□□□□□ -0.32
PTPN21-204ENST00000554178 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
PTPN21-204ENST00000554178 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
PTPN21-204ENST00000554178 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
PTPN21-204ENST00000554178 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
PTPN21-204ENST00000554178 C7orf43Q8WVR3 580 aa13.04□□□□□ -0.32
PTPN21-204ENST00000554178 ABT1Q9ULW3 272 aaKnown RBP13.04□□□□□ -0.32
PTPN21-204ENST00000554178 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
PTPN21-204ENST00000554178 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
PTPN21-204ENST00000554178 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
PTPN21-204ENST00000554178 HSPA8P11142 646 aaKnown RBP13.02□□□□□ -0.33
PTPN21-204ENST00000554178 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
PTPN21-204ENST00000554178 HLFQ16534 295 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.33
PTPN21-204ENST00000554178 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 NBPF15Q8N660 670 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
PTPN21-204ENST00000554178 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
PTPN21-204ENST00000554178 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
PTPN21-204ENST00000554178 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
PTPN21-204ENST00000554178 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
PTPN21-204ENST00000554178 WDR33Q9C0J8 1336 aaKnown RBP13□□□□□ -0.33
PTPN21-204ENST00000554178 CNTROBQ8N137 903 aa13□□□□□ -0.33
PTPN21-204ENST00000554178 SYNE4Q8N205 404 aa13□□□□□ -0.33
PTPN21-204ENST00000554178 ABHD8Q96I13 439 aa13□□□□□ -0.33
PTPN21-204ENST00000554178 WBP1LQ9NX94 342 aa13□□□□□ -0.33
PTPN21-204ENST00000554178 TRAF5O00463 557 aa12.99□□□□□ -0.33
PTPN21-204ENST00000554178 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
PTPN21-204ENST00000554178 DEFB115Q30KQ5 88 aa12.99□□□□□ -0.33
PTPN21-204ENST00000554178 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
PTPN21-204ENST00000554178 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 FZD9O00144 591 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
PTPN21-204ENST00000554178 GPTP24298 496 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
PTPN21-204ENST00000554178 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
PTPN21-204ENST00000554178 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
PTPN21-204ENST00000554178 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
PTPN21-204ENST00000554178 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
PTPN21-204ENST00000554178 EPS15P42566 896 aa12.97□□□□□ -0.33
PTPN21-204ENST00000554178 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPN21-204ENST00000554178 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
PTPN21-204ENST00000554178 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
PTPN21-204ENST00000554178 GPC2Q8N158 579 aa12.97□□□□□ -0.33
PTPN21-204ENST00000554178 DDX21Q9NR30 783 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPN21-204ENST00000554178 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
PTPN21-204ENST00000554178 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
PTPN21-204ENST00000554178 SCNN1DP51172 638 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.33
PTPN21-204ENST00000554178 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
PTPN21-204ENST00000554178 CAPNS2Q96L46 248 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 ZBTB3Q9H5J0 574 aa12.96□□□□□ -0.33
PTPN21-204ENST00000554178 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 CCDC85CA6NKD9 419 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 AOC2O75106 756 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 MYL6BP14649 208 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 EIF6P56537 245 aaKnown RBP12.95□□□□□ -0.34
PTPN21-204ENST00000554178 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 AKAP11Q9UKA4 1901 aa12.95□□□□□ -0.34
PTPN21-204ENST00000554178 PPEF1O14829 653 aaPredicted RBP12.94□□□□□ -0.34
PTPN21-204ENST00000554178 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
PTPN21-204ENST00000554178 PSMD1Q99460 953 aa12.94□□□□□ -0.34
PTPN21-204ENST00000554178 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
PTPN21-204ENST00000554178 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
PTPN21-204ENST00000554178 TNRC18O15417 2968 aaPredicted RBP12.94□□□□□ -0.34
PTPN21-204ENST00000554178 SPEF2Q9C093 1822 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
PTPN21-204ENST00000554178 AOC3Q16853 763 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 ZNF408Q9H9D4 720 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 COL4A1P02462 1669 aa12.93□□□□□ -0.34
PTPN21-204ENST00000554178 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms