RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 RUFY3Q7L099 469 aa14.75□□□□□ -0.05
LRP1-207ENST00000554174 ZCRB1Q8TBF4 217 aaKnown RBP14.75□□□□□ -0.05
LRP1-207ENST00000554174 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
LRP1-207ENST00000554174 A0A087WZG4 1122 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 SLAIN2Q9P270 581 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 NSFL1CQ9UNZ2 370 aaKnown RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 SOS2Q07890 1332 aaPredicted RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 LAMB4A4D0S4 1761 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 CASTP20810 708 aaKnown RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 CASP7P55210 303 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 NMIQ13287 307 aaPredicted RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 COL9A3Q14050 684 aaPredicted RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 PLBD2Q8NHP8 589 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 EDC3Q96F86 508 aaKnown RBP14.74□□□□□ -0.05
LRP1-207ENST00000554174 COPRSQ9NQ92 184 aa14.74□□□□□ -0.05
LRP1-207ENST00000554174 PCDH11XQ9BZA7 1347 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 PCDH11YQ9BZA8 1340 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 ZNF335Q9H4Z2 1342 aaPredicted RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 RABL6Q3YEC7 729 aaPredicted RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 TTLL7Q6ZT98 887 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 DDX54Q8TDD1 881 aaKnown RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 RRAGDQ9NQL2 400 aaPredicted RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 A0A0D9SFI3 127 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 DTNBO60941 627 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 LARGE1O95461 756 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 A1BGP04217 495 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 TFCP2Q12800 502 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 NECTIN1Q15223 517 aa14.73□□□□□ -0.05
LRP1-207ENST00000554174 DBNLQ9UJU6 430 aaKnown RBP14.73□□□□□ -0.05
LRP1-207ENST00000554174 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
LRP1-207ENST00000554174 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
LRP1-207ENST00000554174 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
LRP1-207ENST00000554174 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
LRP1-207ENST00000554174 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
LRP1-207ENST00000554174 RPAP1Q9BWH6 1393 aaPredicted RBP14.71□□□□□ -0.05
LRP1-207ENST00000554174 KCNB2Q92953 911 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 JAKMIP1Q96N16 626 aaKnown RBP14.71□□□□□ -0.05
LRP1-207ENST00000554174 RBM8AQ9Y5S9 174 aaKnown RBP14.71□□□□□ -0.05
LRP1-207ENST00000554174 UBR2Q8IWV8 1755 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 KCPQ6ZWJ8 1503 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 FSD1Q9BTV5 496 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 STRN4Q9NRL3 753 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 LIMCH1Q9UPQ0 1083 aa14.71□□□□□ -0.05
LRP1-207ENST00000554174 SHANK3Q9BYB0 1731 aa14.71□□□□□ -0.06
LRP1-207ENST00000554174 CHGBP05060 677 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 TNNI3KQ59H18 835 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 LMBR1LQ6UX01 489 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 MAP4K1Q92918 833 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 FPGT-TNNI3KV9GXZ4 949 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 COL15A1P39059 1388 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 ERVV-2B6SEH9 535 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 IL2RBP14784 551 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 ZNF445P59923 1031 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 FOXO4P98177 505 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 NKX1-1Q15270 411 aaPredicted RBP14.7□□□□□ -0.06
LRP1-207ENST00000554174 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
LRP1-207ENST00000554174 ZSWIM6Q9HCJ5 1215 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 TMEM63CQ9P1W3 806 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 TAF6LQ9Y6J9 622 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 TCHHQ07283 1943 aa14.7□□□□□ -0.06
LRP1-207ENST00000554174 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
LRP1-207ENST00000554174 CREB3L3Q68CJ9 461 aa14.69□□□□□ -0.06
LRP1-207ENST00000554174 GDPD2Q9HCC8 539 aa14.69□□□□□ -0.06
LRP1-207ENST00000554174 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
LRP1-207ENST00000554174 H7C1W4 665 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 DBNDD2Q9BQY9 259 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 ZBTB3Q9H5J0 574 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 PDRG1Q9NUG6 133 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 NUP188Q5SRE5 1749 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 HIP1O00291 1037 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 ATP5JP18859 108 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 MED23Q9ULK4 1368 aa14.68□□□□□ -0.06
LRP1-207ENST00000554174 SLC27A2O14975 620 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 ST3GAL1Q11201 340 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 TM6SF1Q9BZW5 370 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 CYP46A1Q9Y6A2 500 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 PAPPAQ13219 1627 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 KCNJ4P48050 445 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 PRIM1P49642 420 aaKnown RBP14.67□□□□□ -0.06
LRP1-207ENST00000554174 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 CCDC9Q9Y3X0 531 aaKnown RBP14.67□□□□□ -0.06
LRP1-207ENST00000554174 TJP1Q07157 1748 aa14.67□□□□□ -0.06
LRP1-207ENST00000554174 WDR33Q9C0J8 1336 aaKnown RBP14.67□□□□□ -0.06
LRP1-207ENST00000554174 SYT1P21579 422 aa14.66□□□□□ -0.06
LRP1-207ENST00000554174 NASPP49321 788 aaPredicted RBP14.66□□□□□ -0.06
LRP1-207ENST00000554174 CWC25Q9NXE8 425 aaPredicted RBP14.66□□□□□ -0.06
LRP1-207ENST00000554174 GADD45BO75293 160 aaPredicted RBP14.66□□□□□ -0.06
LRP1-207ENST00000554174 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms