RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 C21orf2O43822 256 aa18.34■□□□□ 0.53
PRKCH-207ENST00000553831 C9orf131Q5VYM1 1079 aa18.34■□□□□ 0.53
PRKCH-207ENST00000553831 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
PRKCH-207ENST00000553831 NFKBIEO00221 500 aa18.33■□□□□ 0.52
PRKCH-207ENST00000553831 GOLGA2Q08379 1002 aa18.33■□□□□ 0.52
PRKCH-207ENST00000553831 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
PRKCH-207ENST00000553831 RNF123Q5XPI4 1314 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
PRKCH-207ENST00000553831 PRELPP51888 382 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 C3orf67Q6ZVT6 689 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 ZNF526Q8TF50 670 aaPredicted RBP18.32■□□□□ 0.52
PRKCH-207ENST00000553831 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
PRKCH-207ENST00000553831 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
PRKCH-207ENST00000553831 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
PRKCH-207ENST00000553831 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
PRKCH-207ENST00000553831 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
PRKCH-207ENST00000553831 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
PRKCH-207ENST00000553831 SYNE4Q8N205 404 aa18.3■□□□□ 0.52
PRKCH-207ENST00000553831 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
PRKCH-207ENST00000553831 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
PRKCH-207ENST00000553831 SBF1O95248 1867 aa18.3■□□□□ 0.52
PRKCH-207ENST00000553831 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
PRKCH-207ENST00000553831 LMNB1P20700 586 aa18.29■□□□□ 0.52
PRKCH-207ENST00000553831 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
PRKCH-207ENST00000553831 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
PRKCH-207ENST00000553831 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
PRKCH-207ENST00000553831 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
PRKCH-207ENST00000553831 GPBP1L1Q9HC44 474 aaPredicted RBP18.29■□□□□ 0.52
PRKCH-207ENST00000553831 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
PRKCH-207ENST00000553831 VAMP4O75379 141 aa18.28■□□□□ 0.52
PRKCH-207ENST00000553831 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
PRKCH-207ENST00000553831 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
PRKCH-207ENST00000553831 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
PRKCH-207ENST00000553831 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
PRKCH-207ENST00000553831 NLRP3Q96P20 1036 aa18.28■□□□□ 0.52
PRKCH-207ENST00000553831 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
PRKCH-207ENST00000553831 CCDC93Q567U6 631 aa18.27■□□□□ 0.52
PRKCH-207ENST00000553831 OLFM4Q6UX06 510 aa18.27■□□□□ 0.52
PRKCH-207ENST00000553831 G2E3Q7L622 706 aa18.27■□□□□ 0.52
PRKCH-207ENST00000553831 MYD88Q99836 296 aa18.27■□□□□ 0.52
PRKCH-207ENST00000553831 TAOK3Q9H2K8 898 aa18.27■□□□□ 0.52
PRKCH-207ENST00000553831 LTBP3Q9NS15 1303 aa18.26■□□□□ 0.51
PRKCH-207ENST00000553831 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
PRKCH-207ENST00000553831 FAM89AQ96GI7 184 aa18.26■□□□□ 0.51
PRKCH-207ENST00000553831 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
PRKCH-207ENST00000553831 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
PRKCH-207ENST00000553831 LAMB2P55268 1798 aa18.26■□□□□ 0.51
PRKCH-207ENST00000553831 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
PRKCH-207ENST00000553831 METTL22Q9BUU2 404 aaPredicted RBP18.25■□□□□ 0.51
PRKCH-207ENST00000553831 TIAM2Q8IVF5 1701 aa18.25■□□□□ 0.51
PRKCH-207ENST00000553831 DDX60Q8IY21 1712 aaKnown RBP18.25■□□□□ 0.51
PRKCH-207ENST00000553831 PI4KAP2A4QPH2 592 aa18.24■□□□□ 0.51
PRKCH-207ENST00000553831 FLIIQ13045 1269 aa18.24■□□□□ 0.51
PRKCH-207ENST00000553831 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
PRKCH-207ENST00000553831 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
PRKCH-207ENST00000553831 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
PRKCH-207ENST00000553831 PI4KAP1Q8N8J0 262 aa18.24■□□□□ 0.51
PRKCH-207ENST00000553831 ABCC4O15439 1325 aa18.23■□□□□ 0.51
PRKCH-207ENST00000553831 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
PRKCH-207ENST00000553831 SNED1Q8TER0 1413 aa18.23■□□□□ 0.51
PRKCH-207ENST00000553831 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
PRKCH-207ENST00000553831 MIER1Q8N108 512 aa18.23■□□□□ 0.51
PRKCH-207ENST00000553831 CCDC191Q8NCU4 936 aa18.23■□□□□ 0.51
PRKCH-207ENST00000553831 E9PSI1 815 aa18.22■□□□□ 0.51
PRKCH-207ENST00000553831 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-207ENST00000553831 PPEF1O14829 653 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-207ENST00000553831 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRKCH-207ENST00000553831 ZBTB38Q8NAP3 1195 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-207ENST00000553831 CWC25Q9NXE8 425 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-207ENST00000553831 IGKV5-2P06315 115 aa18.21■□□□□ 0.51
PRKCH-207ENST00000553831 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
PRKCH-207ENST00000553831 DICER1Q9UPY3 1922 aaKnown RBP18.2■□□□□ 0.5
PRKCH-207ENST00000553831 KIF3CO14782 793 aa18.2■□□□□ 0.5
PRKCH-207ENST00000553831 FKBP5Q13451 457 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-207ENST00000553831 CC2D2BQ6DHV5 1058 aa18.2■□□□□ 0.5
PRKCH-207ENST00000553831 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
PRKCH-207ENST00000553831 NMRK2Q9NPI5 230 aa18.2■□□□□ 0.5
PRKCH-207ENST00000553831 ZNF277Q9NRM2 450 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-207ENST00000553831 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
PRKCH-207ENST00000553831 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
PRKCH-207ENST00000553831 C1QTNF8P60827 252 aa18.19■□□□□ 0.5
PRKCH-207ENST00000553831 SLFN5Q08AF3 891 aa18.19■□□□□ 0.5
PRKCH-207ENST00000553831 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
PRKCH-207ENST00000553831 JARID2Q92833 1246 aaPredicted RBP18.19■□□□□ 0.5
PRKCH-207ENST00000553831 KDM2BQ8NHM5 1336 aa18.19■□□□□ 0.5
PRKCH-207ENST00000553831 GRAPQ13588 217 aa18.18■□□□□ 0.5
PRKCH-207ENST00000553831 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
PRKCH-207ENST00000553831 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
PRKCH-207ENST00000553831 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
PRKCH-207ENST00000553831 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
PRKCH-207ENST00000553831 PSMD1Q99460 953 aa18.18■□□□□ 0.5
PRKCH-207ENST00000553831 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
PRKCH-207ENST00000553831 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
PRKCH-207ENST00000553831 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
PRKCH-207ENST00000553831 COL4A1P02462 1669 aa18.16■□□□□ 0.5
PRKCH-207ENST00000553831 GLTPD2A6NH11 291 aa18.16■□□□□ 0.5
PRKCH-207ENST00000553831 BBOX1O75936 387 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms